Evaluation of Genetic Diversity of Papaver bractaetum Lindl. Populations in Alborz Mountain Using SCoT Molecular Markers

Background: Iranin poppy (Papaver bracteatum Lindl.) belongs to Papaveraceae family which has important alkaloids such as thebain. Objective: Investigation of genetic diversity and population structure of Iranian poppy populations from Alborz Mountains. Methods: Total DNA from 36 genotypes (12 indiv...

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Main Authors: javad shaghaghi, alaeddin kordenaeej, ardeshir qaderi
Format: Article
Language:English
Published: Institue of Medicinal Plants, ACECR 2019-12-01
Series:Journal of Medicinal Plants
Subjects:
Online Access:http://jmp.ir/article-1-2553-en.html
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spelling doaj-4e79af48ae0f4c2a95af398fb6d9ac232021-09-19T04:17:56ZengInstitue of Medicinal Plants, ACECRJournal of Medicinal Plants2717-204X2717-20582019-12-01187290102Evaluation of Genetic Diversity of Papaver bractaetum Lindl. Populations in Alborz Mountain Using SCoT Molecular Markersjavad shaghaghi0alaeddin kordenaeej1ardeshir qaderi2 Department of Agricultural and Plant Breeding, Faculty of Agriculture, Shahed University, Tehran, Iran Department of Agricultural and Plant Breeding, Faculty of Agriculture, Shahed University, Tehran, Iran Medicinal Plant Research Center, Institute of Medicinal Plants, ACECR, Karaj, Iran Background: Iranin poppy (Papaver bracteatum Lindl.) belongs to Papaveraceae family which has important alkaloids such as thebain. Objective: Investigation of genetic diversity and population structure of Iranian poppy populations from Alborz Mountains. Methods: Total DNA from 36 genotypes (12 individuals from each population) were extracted by doyle method. Thebaine of capsules were assayed by High performance liquid chromatography (HPLC) against standard curve of thebaine. Results: The 12 primers from 26applied SCoT primers amplified 181 scorable bands. Polymorphism Information Contents (PIC) index ranged from 0.233 to 0.335 with 0.289 mean. Resolving Power (RP) index ranged from 2.61 to 6.5. based on AMOVA the variance of within and among population were 57% and 43% respectively. Unweighted pair group method with arithmetic mean (UPGMA) based clustering grouped 36 genotypes into three main groups that was supported by principal coordinate analyses (PCoA). The highest (0.86) and lowest (0.76) similarity were between Polur, Siahbisheh and Taham, Siahbisheh populations respectively. Also, thebaine content was differences between populations. The maximum and minimum thebaine content was obtained in Polur and Taham population respectively. Conclusion: The results showed that the SCoT markers can separate the Iranian poppy population and it’s an efficient tool for study of genetic diversity and population structure. Also results clarified considerable genetic diversity among P. bracteatum population in Alboraz mountains. Based on results of phytochemical and genetic study, thebaine production in Iranian poppy is controled by genetic and environment factors.http://jmp.ir/article-1-2553-en.html<i>papaver bractaetum</i> lindl.genetic variationcluster analyzescot marker
collection DOAJ
language English
format Article
sources DOAJ
author javad shaghaghi
alaeddin kordenaeej
ardeshir qaderi
spellingShingle javad shaghaghi
alaeddin kordenaeej
ardeshir qaderi
Evaluation of Genetic Diversity of Papaver bractaetum Lindl. Populations in Alborz Mountain Using SCoT Molecular Markers
Journal of Medicinal Plants
<i>papaver bractaetum</i> lindl.
genetic variation
cluster analyze
scot marker
author_facet javad shaghaghi
alaeddin kordenaeej
ardeshir qaderi
author_sort javad shaghaghi
title Evaluation of Genetic Diversity of Papaver bractaetum Lindl. Populations in Alborz Mountain Using SCoT Molecular Markers
title_short Evaluation of Genetic Diversity of Papaver bractaetum Lindl. Populations in Alborz Mountain Using SCoT Molecular Markers
title_full Evaluation of Genetic Diversity of Papaver bractaetum Lindl. Populations in Alborz Mountain Using SCoT Molecular Markers
title_fullStr Evaluation of Genetic Diversity of Papaver bractaetum Lindl. Populations in Alborz Mountain Using SCoT Molecular Markers
title_full_unstemmed Evaluation of Genetic Diversity of Papaver bractaetum Lindl. Populations in Alborz Mountain Using SCoT Molecular Markers
title_sort evaluation of genetic diversity of papaver bractaetum lindl. populations in alborz mountain using scot molecular markers
publisher Institue of Medicinal Plants, ACECR
series Journal of Medicinal Plants
issn 2717-204X
2717-2058
publishDate 2019-12-01
description Background: Iranin poppy (Papaver bracteatum Lindl.) belongs to Papaveraceae family which has important alkaloids such as thebain. Objective: Investigation of genetic diversity and population structure of Iranian poppy populations from Alborz Mountains. Methods: Total DNA from 36 genotypes (12 individuals from each population) were extracted by doyle method. Thebaine of capsules were assayed by High performance liquid chromatography (HPLC) against standard curve of thebaine. Results: The 12 primers from 26applied SCoT primers amplified 181 scorable bands. Polymorphism Information Contents (PIC) index ranged from 0.233 to 0.335 with 0.289 mean. Resolving Power (RP) index ranged from 2.61 to 6.5. based on AMOVA the variance of within and among population were 57% and 43% respectively. Unweighted pair group method with arithmetic mean (UPGMA) based clustering grouped 36 genotypes into three main groups that was supported by principal coordinate analyses (PCoA). The highest (0.86) and lowest (0.76) similarity were between Polur, Siahbisheh and Taham, Siahbisheh populations respectively. Also, thebaine content was differences between populations. The maximum and minimum thebaine content was obtained in Polur and Taham population respectively. Conclusion: The results showed that the SCoT markers can separate the Iranian poppy population and it’s an efficient tool for study of genetic diversity and population structure. Also results clarified considerable genetic diversity among P. bracteatum population in Alboraz mountains. Based on results of phytochemical and genetic study, thebaine production in Iranian poppy is controled by genetic and environment factors.
topic <i>papaver bractaetum</i> lindl.
genetic variation
cluster analyze
scot marker
url http://jmp.ir/article-1-2553-en.html
work_keys_str_mv AT javadshaghaghi evaluationofgeneticdiversityofpapaverbractaetumlindlpopulationsinalborzmountainusingscotmolecularmarkers
AT alaeddinkordenaeej evaluationofgeneticdiversityofpapaverbractaetumlindlpopulationsinalborzmountainusingscotmolecularmarkers
AT ardeshirqaderi evaluationofgeneticdiversityofpapaverbractaetumlindlpopulationsinalborzmountainusingscotmolecularmarkers
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