Verification of the <i>Saccharina japonica</i> Translocon <i>Tic20</i> and its Localization in the Chloroplast Membrane in Diatoms

Tic20 is an important translocon protein that plays a role in protein transport in the chloroplast. The sequence of Tic20 was determined in the lower brown alga <i>Saccharina japonica</i>. Structural analysis of SjTic20 revealed a noncanonical structure consisting of an N-terminal non-cy...

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Main Authors: Zhihang Chen, Xiuliang Wang, Shuang Li, Jianting Yao, Zhanru Shao, Delin Duan
Format: Article
Language:English
Published: MDPI AG 2019-08-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/20/16/4000
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spelling doaj-4fdfb0aa615b4894ad03cf775a0981db2020-11-25T00:50:11ZengMDPI AGInternational Journal of Molecular Sciences1422-00672019-08-012016400010.3390/ijms20164000ijms20164000Verification of the <i>Saccharina japonica</i> Translocon <i>Tic20</i> and its Localization in the Chloroplast Membrane in DiatomsZhihang Chen0Xiuliang Wang1Shuang Li2Jianting Yao3Zhanru Shao4Delin Duan5Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, ChinaKey Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, ChinaKey Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, ChinaKey Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, ChinaKey Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, ChinaKey Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, ChinaTic20 is an important translocon protein that plays a role in protein transport in the chloroplast. The sequence of Tic20 was determined in the lower brown alga <i>Saccharina japonica</i>. Structural analysis of SjTic20 revealed a noncanonical structure consisting of an N-terminal non-cyanobacterium-originated EF-hand domain (a helix-loop-helix structural domain) and a C-terminal cyanobacterium-originated Tic20 domain. Subcellular localization and transmembrane analysis indicated that SjTic20 featured an &#8220;M&#8221;-type N<sub>in</sub>-C<sub>in</sub>-terminal orientation, with four transmembrane domains in the innermost membrane of the chloroplast in the microalga <i>Phaeodactylum tricornutum</i>, and the EF-hand domain was entirely extruded into the chloroplast stroma. Our study provides information on the structure, localization, and topological features of SjTic20, and further functional analysis of SjTic20 in <i>S. japonica</i> is needed.https://www.mdpi.com/1422-0067/20/16/4000Tic20EF-hand<i>Phaeodactylum tricornutum</i><i>Saccharina japonica</i>subcellular localizationtransmembrane topology
collection DOAJ
language English
format Article
sources DOAJ
author Zhihang Chen
Xiuliang Wang
Shuang Li
Jianting Yao
Zhanru Shao
Delin Duan
spellingShingle Zhihang Chen
Xiuliang Wang
Shuang Li
Jianting Yao
Zhanru Shao
Delin Duan
Verification of the <i>Saccharina japonica</i> Translocon <i>Tic20</i> and its Localization in the Chloroplast Membrane in Diatoms
International Journal of Molecular Sciences
Tic20
EF-hand
<i>Phaeodactylum tricornutum</i>
<i>Saccharina japonica</i>
subcellular localization
transmembrane topology
author_facet Zhihang Chen
Xiuliang Wang
Shuang Li
Jianting Yao
Zhanru Shao
Delin Duan
author_sort Zhihang Chen
title Verification of the <i>Saccharina japonica</i> Translocon <i>Tic20</i> and its Localization in the Chloroplast Membrane in Diatoms
title_short Verification of the <i>Saccharina japonica</i> Translocon <i>Tic20</i> and its Localization in the Chloroplast Membrane in Diatoms
title_full Verification of the <i>Saccharina japonica</i> Translocon <i>Tic20</i> and its Localization in the Chloroplast Membrane in Diatoms
title_fullStr Verification of the <i>Saccharina japonica</i> Translocon <i>Tic20</i> and its Localization in the Chloroplast Membrane in Diatoms
title_full_unstemmed Verification of the <i>Saccharina japonica</i> Translocon <i>Tic20</i> and its Localization in the Chloroplast Membrane in Diatoms
title_sort verification of the <i>saccharina japonica</i> translocon <i>tic20</i> and its localization in the chloroplast membrane in diatoms
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2019-08-01
description Tic20 is an important translocon protein that plays a role in protein transport in the chloroplast. The sequence of Tic20 was determined in the lower brown alga <i>Saccharina japonica</i>. Structural analysis of SjTic20 revealed a noncanonical structure consisting of an N-terminal non-cyanobacterium-originated EF-hand domain (a helix-loop-helix structural domain) and a C-terminal cyanobacterium-originated Tic20 domain. Subcellular localization and transmembrane analysis indicated that SjTic20 featured an &#8220;M&#8221;-type N<sub>in</sub>-C<sub>in</sub>-terminal orientation, with four transmembrane domains in the innermost membrane of the chloroplast in the microalga <i>Phaeodactylum tricornutum</i>, and the EF-hand domain was entirely extruded into the chloroplast stroma. Our study provides information on the structure, localization, and topological features of SjTic20, and further functional analysis of SjTic20 in <i>S. japonica</i> is needed.
topic Tic20
EF-hand
<i>Phaeodactylum tricornutum</i>
<i>Saccharina japonica</i>
subcellular localization
transmembrane topology
url https://www.mdpi.com/1422-0067/20/16/4000
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