Accelerated knowledge discovery from omics data by optimal experimental design

How to design experiments that accelerate knowledge discovery on complex biological landscapes remains a tantalizing question. Here, the authors present OPEX, an optimal experimental design method to identify informative omics experiments for both experimental space exploration and model training.

Bibliographic Details
Main Authors: Xiaokang Wang, Navneet Rai, Beatriz Merchel Piovesan Pereira, Ameen Eetemadi, Ilias Tagkopoulos
Format: Article
Language:English
Published: Nature Publishing Group 2020-10-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-020-18785-y
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spelling doaj-502d1976d92e47d890e9fea7dc64c1512021-10-10T11:46:42ZengNature Publishing GroupNature Communications2041-17232020-10-011111910.1038/s41467-020-18785-yAccelerated knowledge discovery from omics data by optimal experimental designXiaokang Wang0Navneet Rai1Beatriz Merchel Piovesan Pereira2Ameen Eetemadi3Ilias Tagkopoulos4Department of Biomedical Engineering, University of CaliforniaGenome Center, University of CaliforniaGenome Center, University of CaliforniaGenome Center, University of CaliforniaGenome Center, University of CaliforniaHow to design experiments that accelerate knowledge discovery on complex biological landscapes remains a tantalizing question. Here, the authors present OPEX, an optimal experimental design method to identify informative omics experiments for both experimental space exploration and model training.https://doi.org/10.1038/s41467-020-18785-y
collection DOAJ
language English
format Article
sources DOAJ
author Xiaokang Wang
Navneet Rai
Beatriz Merchel Piovesan Pereira
Ameen Eetemadi
Ilias Tagkopoulos
spellingShingle Xiaokang Wang
Navneet Rai
Beatriz Merchel Piovesan Pereira
Ameen Eetemadi
Ilias Tagkopoulos
Accelerated knowledge discovery from omics data by optimal experimental design
Nature Communications
author_facet Xiaokang Wang
Navneet Rai
Beatriz Merchel Piovesan Pereira
Ameen Eetemadi
Ilias Tagkopoulos
author_sort Xiaokang Wang
title Accelerated knowledge discovery from omics data by optimal experimental design
title_short Accelerated knowledge discovery from omics data by optimal experimental design
title_full Accelerated knowledge discovery from omics data by optimal experimental design
title_fullStr Accelerated knowledge discovery from omics data by optimal experimental design
title_full_unstemmed Accelerated knowledge discovery from omics data by optimal experimental design
title_sort accelerated knowledge discovery from omics data by optimal experimental design
publisher Nature Publishing Group
series Nature Communications
issn 2041-1723
publishDate 2020-10-01
description How to design experiments that accelerate knowledge discovery on complex biological landscapes remains a tantalizing question. Here, the authors present OPEX, an optimal experimental design method to identify informative omics experiments for both experimental space exploration and model training.
url https://doi.org/10.1038/s41467-020-18785-y
work_keys_str_mv AT xiaokangwang acceleratedknowledgediscoveryfromomicsdatabyoptimalexperimentaldesign
AT navneetrai acceleratedknowledgediscoveryfromomicsdatabyoptimalexperimentaldesign
AT beatrizmerchelpiovesanpereira acceleratedknowledgediscoveryfromomicsdatabyoptimalexperimentaldesign
AT ameeneetemadi acceleratedknowledgediscoveryfromomicsdatabyoptimalexperimentaldesign
AT iliastagkopoulos acceleratedknowledgediscoveryfromomicsdatabyoptimalexperimentaldesign
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