No evidence for involvement of <it>SDHD </it>in neuroblastoma pathogenesis

<p>Abstract</p> <p>Background</p> <p>Deletions in the long arm of chromosome 11 are observed in a subgroup of advanced stage neuroblastomas with poor outcome. The deleted region harbours the tumour suppressor gene <it>SDHD </it>that is frequently mutated in...

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Main Authors: Roels Frank, Van Roy Nadine, Combaret Valérie, Laureys Geneviève, Nuyts Annick, Smet Jöel, Vandenbroecke Caroline, Hoebeeck Jasmien, Vandesompele Jo, De Preter Katleen, Van Coster Rudy, Praet Marleen, De Paepe Anne, Speleman Frank
Format: Article
Language:English
Published: BMC 2004-08-01
Series:BMC Cancer
Online Access:http://www.biomedcentral.com/1471-2407/4/55
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spelling doaj-51f48fc95e434df7ac990683cb9ead2d2020-11-24T23:16:29ZengBMCBMC Cancer1471-24072004-08-01415510.1186/1471-2407-4-55No evidence for involvement of <it>SDHD </it>in neuroblastoma pathogenesisRoels FrankVan Roy NadineCombaret ValérieLaureys GenevièveNuyts AnnickSmet JöelVandenbroecke CarolineHoebeeck JasmienVandesompele JoDe Preter KatleenVan Coster RudyPraet MarleenDe Paepe AnneSpeleman Frank<p>Abstract</p> <p>Background</p> <p>Deletions in the long arm of chromosome 11 are observed in a subgroup of advanced stage neuroblastomas with poor outcome. The deleted region harbours the tumour suppressor gene <it>SDHD </it>that is frequently mutated in paraganglioma and pheochromocytoma, which are, like neuroblastoma, tumours originating from the neural crest. In this study, we sought for evidence for involvement of <it>SDHD </it>in neuroblastoma.</p> <p>Methods</p> <p><it>SDHD </it>was investigated on the genome, transcriptome and proteome level using mutation screening, methylation specific PCR, real-time quantitative PCR based homozygous deletion screening and mRNA expression profiling, immunoblotting, functional protein analysis and ultrastructural imaging of the mitochondria.</p> <p>Results</p> <p>Analysis at the genomic level of 67 tumour samples and 37 cell lines revealed at least 2 bona-fide mutations in cell lines without allelic loss at 11q23: a 4bp-deletion causing skip of exon 3 resulting in a premature stop codon in cell line N206, and a Y93C mutation in cell line NMB located in a region affected by germline <it>SDHD </it>mutations causing hereditary paraganglioma. No evidence for hypermethylation of the <it>SDHD </it>promotor region was observed, nor could we detect homozygous deletions. Interestingly, <it>SDHD </it>mRNA expression was significantly reduced in <it>SDHD </it>mutated cell lines and cell lines with 11q allelic loss as compared to both cell lines without 11q allelic loss and normal foetal neuroblast cells. However, protein analyses and assessment of mitochondrial morphology presently do not provide clues as to the possible effect of reduced <it>SDHD </it>expression on the neuroblastoma tumour phenotype.</p> <p>Conclusions</p> <p>Our study provides no indications for 2-hit involvement of <it>SDHD </it>in the pathogenesis of neuroblastoma. Also, although a haplo-insufficient mechanism for <it>SDHD </it>involvement in advanced stage neuroblastoma could be considered, the present data do not provide consistent evidence for this hypothesis.</p> http://www.biomedcentral.com/1471-2407/4/55
collection DOAJ
language English
format Article
sources DOAJ
author Roels Frank
Van Roy Nadine
Combaret Valérie
Laureys Geneviève
Nuyts Annick
Smet Jöel
Vandenbroecke Caroline
Hoebeeck Jasmien
Vandesompele Jo
De Preter Katleen
Van Coster Rudy
Praet Marleen
De Paepe Anne
Speleman Frank
spellingShingle Roels Frank
Van Roy Nadine
Combaret Valérie
Laureys Geneviève
Nuyts Annick
Smet Jöel
Vandenbroecke Caroline
Hoebeeck Jasmien
Vandesompele Jo
De Preter Katleen
Van Coster Rudy
Praet Marleen
De Paepe Anne
Speleman Frank
No evidence for involvement of <it>SDHD </it>in neuroblastoma pathogenesis
BMC Cancer
author_facet Roels Frank
Van Roy Nadine
Combaret Valérie
Laureys Geneviève
Nuyts Annick
Smet Jöel
Vandenbroecke Caroline
Hoebeeck Jasmien
Vandesompele Jo
De Preter Katleen
Van Coster Rudy
Praet Marleen
De Paepe Anne
Speleman Frank
author_sort Roels Frank
title No evidence for involvement of <it>SDHD </it>in neuroblastoma pathogenesis
title_short No evidence for involvement of <it>SDHD </it>in neuroblastoma pathogenesis
title_full No evidence for involvement of <it>SDHD </it>in neuroblastoma pathogenesis
title_fullStr No evidence for involvement of <it>SDHD </it>in neuroblastoma pathogenesis
title_full_unstemmed No evidence for involvement of <it>SDHD </it>in neuroblastoma pathogenesis
title_sort no evidence for involvement of <it>sdhd </it>in neuroblastoma pathogenesis
publisher BMC
series BMC Cancer
issn 1471-2407
publishDate 2004-08-01
description <p>Abstract</p> <p>Background</p> <p>Deletions in the long arm of chromosome 11 are observed in a subgroup of advanced stage neuroblastomas with poor outcome. The deleted region harbours the tumour suppressor gene <it>SDHD </it>that is frequently mutated in paraganglioma and pheochromocytoma, which are, like neuroblastoma, tumours originating from the neural crest. In this study, we sought for evidence for involvement of <it>SDHD </it>in neuroblastoma.</p> <p>Methods</p> <p><it>SDHD </it>was investigated on the genome, transcriptome and proteome level using mutation screening, methylation specific PCR, real-time quantitative PCR based homozygous deletion screening and mRNA expression profiling, immunoblotting, functional protein analysis and ultrastructural imaging of the mitochondria.</p> <p>Results</p> <p>Analysis at the genomic level of 67 tumour samples and 37 cell lines revealed at least 2 bona-fide mutations in cell lines without allelic loss at 11q23: a 4bp-deletion causing skip of exon 3 resulting in a premature stop codon in cell line N206, and a Y93C mutation in cell line NMB located in a region affected by germline <it>SDHD </it>mutations causing hereditary paraganglioma. No evidence for hypermethylation of the <it>SDHD </it>promotor region was observed, nor could we detect homozygous deletions. Interestingly, <it>SDHD </it>mRNA expression was significantly reduced in <it>SDHD </it>mutated cell lines and cell lines with 11q allelic loss as compared to both cell lines without 11q allelic loss and normal foetal neuroblast cells. However, protein analyses and assessment of mitochondrial morphology presently do not provide clues as to the possible effect of reduced <it>SDHD </it>expression on the neuroblastoma tumour phenotype.</p> <p>Conclusions</p> <p>Our study provides no indications for 2-hit involvement of <it>SDHD </it>in the pathogenesis of neuroblastoma. Also, although a haplo-insufficient mechanism for <it>SDHD </it>involvement in advanced stage neuroblastoma could be considered, the present data do not provide consistent evidence for this hypothesis.</p>
url http://www.biomedcentral.com/1471-2407/4/55
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