Development and validation of statistical shape models of the primary functional bone segments of the foot

Introduction Musculoskeletal models are important tools for studying movement patterns, tissue loading, and neuromechanics. Personalising bone anatomy within models improves analysis accuracy. Few studies have focused on personalising foot bone anatomy, potentially incorrectly estimating the foot’s...

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Main Authors: Tamara M. Grant, Laura E. Diamond, Claudio Pizzolato, Bryce A. Killen, Daniel Devaprakash, Luke Kelly, Jayishni N. Maharaj, David J. Saxby
Format: Article
Language:English
Published: PeerJ Inc. 2020-02-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/8397.pdf
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author Tamara M. Grant
Laura E. Diamond
Claudio Pizzolato
Bryce A. Killen
Daniel Devaprakash
Luke Kelly
Jayishni N. Maharaj
David J. Saxby
spellingShingle Tamara M. Grant
Laura E. Diamond
Claudio Pizzolato
Bryce A. Killen
Daniel Devaprakash
Luke Kelly
Jayishni N. Maharaj
David J. Saxby
Development and validation of statistical shape models of the primary functional bone segments of the foot
PeerJ
Musculoskeletal modelling
Statistical shape modelling
Subject-specific modelling
Foot bones
author_facet Tamara M. Grant
Laura E. Diamond
Claudio Pizzolato
Bryce A. Killen
Daniel Devaprakash
Luke Kelly
Jayishni N. Maharaj
David J. Saxby
author_sort Tamara M. Grant
title Development and validation of statistical shape models of the primary functional bone segments of the foot
title_short Development and validation of statistical shape models of the primary functional bone segments of the foot
title_full Development and validation of statistical shape models of the primary functional bone segments of the foot
title_fullStr Development and validation of statistical shape models of the primary functional bone segments of the foot
title_full_unstemmed Development and validation of statistical shape models of the primary functional bone segments of the foot
title_sort development and validation of statistical shape models of the primary functional bone segments of the foot
publisher PeerJ Inc.
series PeerJ
issn 2167-8359
publishDate 2020-02-01
description Introduction Musculoskeletal models are important tools for studying movement patterns, tissue loading, and neuromechanics. Personalising bone anatomy within models improves analysis accuracy. Few studies have focused on personalising foot bone anatomy, potentially incorrectly estimating the foot’s contribution to locomotion. Statistical shape models have been created for a subset of foot-ankle bones, but have not been validated. This study aimed to develop and validate statistical shape models of the functional segments in the foot: first metatarsal, midfoot (second-to-fifth metatarsals, cuneiforms, cuboid, and navicular), calcaneus, and talus; then, to assess reconstruction accuracy of these shape models using sparse anatomical data. Methods Magnetic resonance images of 24 individuals feet (age = 28 ± 6 years, 52% female, height = 1.73 ± 0.8 m, mass = 66.6 ± 13.8 kg) were manually segmented to generate three-dimensional point clouds. Point clouds were registered and analysed using principal component analysis. For each bone segment, a statistical shape model and principal components were created, describing population shape variation. Statistical shape models were validated by assessing reconstruction accuracy in a leave-one-out cross validation. Statistical shape models were created by excluding a participant’s bone segment and used to reconstruct that same excluded bone using full segmentations and sparse anatomical data (i.e. three discrete points on each segment), for all combinations in the dataset. Tali were not reconstructed using sparse anatomical data due to a lack of externally accessible landmarks. Reconstruction accuracy was assessed using Jaccard index, root mean square error (mm), and Hausdorff distance (mm). Results Reconstructions generated using full segmentations had mean Jaccard indices between 0.77 ± 0.04 and 0.89 ± 0.02, mean root mean square errors between 0.88 ± 0.19 and 1.17 ± 0.18 mm, and mean Hausdorff distances between 2.99 ± 0.98 mm and 6.63 ± 3.68 mm. Reconstructions generated using sparse anatomical data had mean Jaccard indices between 0.67 ± 0.06 and 0.83 ± 0.05, mean root mean square error between 1.21 ± 0.54 mm and 1.66 ± 0.41 mm, and mean Hausdorff distances between 3.21 ± 0.94 mm and 7.19 ± 3.54 mm. Jaccard index was higher (P < 0.01) and root mean square error was lower (P < 0.01) in reconstructions from full segmentations compared to sparse anatomical data. Hausdorff distance was lower (P < 0.01) for midfoot and calcaneus reconstructions using full segmentations compared to sparse anatomical data. Conclusion For the first time, statistical shape models of the primary functional segments of the foot were developed and validated. Foot segments can be reconstructed with minimal error using full segmentations and sparse anatomical landmarks. In future, larger training datasets could increase statistical shape model robustness, extending use to paediatric or pathological populations.
topic Musculoskeletal modelling
Statistical shape modelling
Subject-specific modelling
Foot bones
url https://peerj.com/articles/8397.pdf
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spelling doaj-5469072ea15e4594941350b80f6125b02020-11-25T03:48:45ZengPeerJ Inc.PeerJ2167-83592020-02-018e839710.7717/peerj.8397Development and validation of statistical shape models of the primary functional bone segments of the footTamara M. Grant0Laura E. Diamond1Claudio Pizzolato2Bryce A. Killen3Daniel Devaprakash4Luke Kelly5Jayishni N. Maharaj6David J. Saxby7School of Allied Health Sciences, Griffith University, Gold Coast, QLD, AustraliaSchool of Allied Health Sciences, Griffith University, Gold Coast, QLD, AustraliaSchool of Allied Health Sciences, Griffith University, Gold Coast, QLD, AustraliaHuman Movement Biomechanics Research Group, Katholieke Universiteit Leuven, Leuven, BelgiumSchool of Allied Health Sciences, Griffith University, Gold Coast, QLD, AustraliaSchool of Human Movement and Nutritional Sciences, University of Queensland, Brisbane, QLD, AustraliaSchool of Human Movement and Nutritional Sciences, University of Queensland, Brisbane, QLD, AustraliaSchool of Allied Health Sciences, Griffith University, Gold Coast, QLD, AustraliaIntroduction Musculoskeletal models are important tools for studying movement patterns, tissue loading, and neuromechanics. Personalising bone anatomy within models improves analysis accuracy. Few studies have focused on personalising foot bone anatomy, potentially incorrectly estimating the foot’s contribution to locomotion. Statistical shape models have been created for a subset of foot-ankle bones, but have not been validated. This study aimed to develop and validate statistical shape models of the functional segments in the foot: first metatarsal, midfoot (second-to-fifth metatarsals, cuneiforms, cuboid, and navicular), calcaneus, and talus; then, to assess reconstruction accuracy of these shape models using sparse anatomical data. Methods Magnetic resonance images of 24 individuals feet (age = 28 ± 6 years, 52% female, height = 1.73 ± 0.8 m, mass = 66.6 ± 13.8 kg) were manually segmented to generate three-dimensional point clouds. Point clouds were registered and analysed using principal component analysis. For each bone segment, a statistical shape model and principal components were created, describing population shape variation. Statistical shape models were validated by assessing reconstruction accuracy in a leave-one-out cross validation. Statistical shape models were created by excluding a participant’s bone segment and used to reconstruct that same excluded bone using full segmentations and sparse anatomical data (i.e. three discrete points on each segment), for all combinations in the dataset. Tali were not reconstructed using sparse anatomical data due to a lack of externally accessible landmarks. Reconstruction accuracy was assessed using Jaccard index, root mean square error (mm), and Hausdorff distance (mm). Results Reconstructions generated using full segmentations had mean Jaccard indices between 0.77 ± 0.04 and 0.89 ± 0.02, mean root mean square errors between 0.88 ± 0.19 and 1.17 ± 0.18 mm, and mean Hausdorff distances between 2.99 ± 0.98 mm and 6.63 ± 3.68 mm. Reconstructions generated using sparse anatomical data had mean Jaccard indices between 0.67 ± 0.06 and 0.83 ± 0.05, mean root mean square error between 1.21 ± 0.54 mm and 1.66 ± 0.41 mm, and mean Hausdorff distances between 3.21 ± 0.94 mm and 7.19 ± 3.54 mm. Jaccard index was higher (P < 0.01) and root mean square error was lower (P < 0.01) in reconstructions from full segmentations compared to sparse anatomical data. Hausdorff distance was lower (P < 0.01) for midfoot and calcaneus reconstructions using full segmentations compared to sparse anatomical data. Conclusion For the first time, statistical shape models of the primary functional segments of the foot were developed and validated. Foot segments can be reconstructed with minimal error using full segmentations and sparse anatomical landmarks. In future, larger training datasets could increase statistical shape model robustness, extending use to paediatric or pathological populations.https://peerj.com/articles/8397.pdfMusculoskeletal modellingStatistical shape modellingSubject-specific modellingFoot bones