Fast synchronization of ultradian oscillators controlled by delta-notch signaling with cis-inhibition.

While it is known that a large fraction of vertebrate genes are under the control of a gene regulatory network (GRN) forming a clock with circadian periodicity, shorter period oscillatory genes like the Hairy-enhancer-of split (Hes) genes are discussed mostly in connection with the embryonic process...

Full description

Bibliographic Details
Main Authors: Hendrik B Tiedemann, Elida Schneltzer, Stefan Zeiser, Wolfgang Wurst, Johannes Beckers, Gerhard K H Przemeck, Martin Hrabě de Angelis
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2014-10-01
Series:PLoS Computational Biology
Online Access:http://europepmc.org/articles/PMC4196275?pdf=render
id doaj-58495b9b848946f4bf683f798c11a0bb
record_format Article
spelling doaj-58495b9b848946f4bf683f798c11a0bb2020-11-25T01:46:02ZengPublic Library of Science (PLoS)PLoS Computational Biology1553-734X1553-73582014-10-011010e100384310.1371/journal.pcbi.1003843Fast synchronization of ultradian oscillators controlled by delta-notch signaling with cis-inhibition.Hendrik B TiedemannElida SchneltzerStefan ZeiserWolfgang WurstJohannes BeckersGerhard K H PrzemeckMartin Hrabě de AngelisWhile it is known that a large fraction of vertebrate genes are under the control of a gene regulatory network (GRN) forming a clock with circadian periodicity, shorter period oscillatory genes like the Hairy-enhancer-of split (Hes) genes are discussed mostly in connection with the embryonic process of somitogenesis. They form the core of the somitogenesis-clock, which orchestrates the periodic separation of somites from the presomitic mesoderm (PSM). The formation of sharp boundaries between the blocks of many cells works only when the oscillators in the cells forming the boundary are synchronized. It has been shown experimentally that Delta-Notch (D/N) signaling is responsible for this synchronization. This process has to happen rather fast as a cell experiences at most five oscillations from its 'birth' to its incorporation into a somite. Computer simulations describing synchronized oscillators with classical modes of D/N-interaction have difficulties to achieve synchronization in an appropriate time. One approach to solving this problem of modeling fast synchronization in the PSM was the consideration of cell movements. Here we show that fast synchronization of Hes-type oscillators can be achieved without cell movements by including D/N cis-inhibition, wherein the mutual interaction of DELTA and NOTCH in the same cell leads to a titration of ligand against receptor so that only one sort of molecule prevails. Consequently, the symmetry between sender and receiver is partially broken and one cell becomes preferentially sender or receiver at a given moment, which leads to faster entrainment of oscillators. Although not yet confirmed by experiment, the proposed mechanism of enhanced synchronization of mesenchymal cells in the PSM would be a new distinct developmental mechanism employing D/N cis-inhibition. Consequently, the way in which Delta-Notch signaling was modeled so far should be carefully reconsidered.http://europepmc.org/articles/PMC4196275?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Hendrik B Tiedemann
Elida Schneltzer
Stefan Zeiser
Wolfgang Wurst
Johannes Beckers
Gerhard K H Przemeck
Martin Hrabě de Angelis
spellingShingle Hendrik B Tiedemann
Elida Schneltzer
Stefan Zeiser
Wolfgang Wurst
Johannes Beckers
Gerhard K H Przemeck
Martin Hrabě de Angelis
Fast synchronization of ultradian oscillators controlled by delta-notch signaling with cis-inhibition.
PLoS Computational Biology
author_facet Hendrik B Tiedemann
Elida Schneltzer
Stefan Zeiser
Wolfgang Wurst
Johannes Beckers
Gerhard K H Przemeck
Martin Hrabě de Angelis
author_sort Hendrik B Tiedemann
title Fast synchronization of ultradian oscillators controlled by delta-notch signaling with cis-inhibition.
title_short Fast synchronization of ultradian oscillators controlled by delta-notch signaling with cis-inhibition.
title_full Fast synchronization of ultradian oscillators controlled by delta-notch signaling with cis-inhibition.
title_fullStr Fast synchronization of ultradian oscillators controlled by delta-notch signaling with cis-inhibition.
title_full_unstemmed Fast synchronization of ultradian oscillators controlled by delta-notch signaling with cis-inhibition.
title_sort fast synchronization of ultradian oscillators controlled by delta-notch signaling with cis-inhibition.
publisher Public Library of Science (PLoS)
series PLoS Computational Biology
issn 1553-734X
1553-7358
publishDate 2014-10-01
description While it is known that a large fraction of vertebrate genes are under the control of a gene regulatory network (GRN) forming a clock with circadian periodicity, shorter period oscillatory genes like the Hairy-enhancer-of split (Hes) genes are discussed mostly in connection with the embryonic process of somitogenesis. They form the core of the somitogenesis-clock, which orchestrates the periodic separation of somites from the presomitic mesoderm (PSM). The formation of sharp boundaries between the blocks of many cells works only when the oscillators in the cells forming the boundary are synchronized. It has been shown experimentally that Delta-Notch (D/N) signaling is responsible for this synchronization. This process has to happen rather fast as a cell experiences at most five oscillations from its 'birth' to its incorporation into a somite. Computer simulations describing synchronized oscillators with classical modes of D/N-interaction have difficulties to achieve synchronization in an appropriate time. One approach to solving this problem of modeling fast synchronization in the PSM was the consideration of cell movements. Here we show that fast synchronization of Hes-type oscillators can be achieved without cell movements by including D/N cis-inhibition, wherein the mutual interaction of DELTA and NOTCH in the same cell leads to a titration of ligand against receptor so that only one sort of molecule prevails. Consequently, the symmetry between sender and receiver is partially broken and one cell becomes preferentially sender or receiver at a given moment, which leads to faster entrainment of oscillators. Although not yet confirmed by experiment, the proposed mechanism of enhanced synchronization of mesenchymal cells in the PSM would be a new distinct developmental mechanism employing D/N cis-inhibition. Consequently, the way in which Delta-Notch signaling was modeled so far should be carefully reconsidered.
url http://europepmc.org/articles/PMC4196275?pdf=render
work_keys_str_mv AT hendrikbtiedemann fastsynchronizationofultradianoscillatorscontrolledbydeltanotchsignalingwithcisinhibition
AT elidaschneltzer fastsynchronizationofultradianoscillatorscontrolledbydeltanotchsignalingwithcisinhibition
AT stefanzeiser fastsynchronizationofultradianoscillatorscontrolledbydeltanotchsignalingwithcisinhibition
AT wolfgangwurst fastsynchronizationofultradianoscillatorscontrolledbydeltanotchsignalingwithcisinhibition
AT johannesbeckers fastsynchronizationofultradianoscillatorscontrolledbydeltanotchsignalingwithcisinhibition
AT gerhardkhprzemeck fastsynchronizationofultradianoscillatorscontrolledbydeltanotchsignalingwithcisinhibition
AT martinhrabedeangelis fastsynchronizationofultradianoscillatorscontrolledbydeltanotchsignalingwithcisinhibition
_version_ 1725021154806071296