Photocontrolled reversible self-assembly of dodecamer nitrilase

Abstract Background Naturally photoswitchable proteins act as a powerful tool for the spatial and temporal control of biological processes by inducing the formation of a photodimerizer. In this study, a method for the precise and reversible inducible self-assembly of dodecamer nitrilase in vivo (in...

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Main Authors: Qiao Yu, Yong Wang, Shengyun Zhao, Yuhong Ren
Format: Article
Language:English
Published: SpringerOpen 2017-08-01
Series:Bioresources and Bioprocessing
Subjects:
Online Access:http://link.springer.com/article/10.1186/s40643-017-0167-3
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spelling doaj-5a0b44c6bb7f403a8878690a61190f5a2020-11-25T02:19:06ZengSpringerOpenBioresources and Bioprocessing2197-43652017-08-01411810.1186/s40643-017-0167-3Photocontrolled reversible self-assembly of dodecamer nitrilaseQiao Yu0Yong Wang1Shengyun Zhao2Yuhong Ren3East China University of Science and TechnologyKey Laboratory of Synthetic Biology, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of SciencesFujian Key Laboratory of Eco-Industrial Green Technology, Wuyi UniversityState Key Laboratory of Bioreactor Engineering, New World Institute of Biotechnology, East China University of Science and TechnologyAbstract Background Naturally photoswitchable proteins act as a powerful tool for the spatial and temporal control of biological processes by inducing the formation of a photodimerizer. In this study, a method for the precise and reversible inducible self-assembly of dodecamer nitrilase in vivo (in Escherichia coli) and in vitro (in a cell-free solution) was developed by means of the photoswitch-improved light-inducible dimer (iLID) system which could induce protein–protein dimerization. Results Nitrilase was fused with the photoswitch protein AsLOV2-SsrA to achieve the photocontrolled self-assembly of dodecamer nitrilase. The fusion protein self-assembled into a supramolecular assembly when illuminated at 470 nm. Scanning electron microscopy showed that the assembly formed a circular sheet structure. Self-assembly was also induced by light in E. coli. Dynamic light scattering and turbidity assay experiments showed that the assemblies formed within a few seconds under 470-nm light and completely disassembled within 5 min in the dark. Assembly and disassembly could be maintained for at least five cycles. Both in vitro and in vivo, the assemblies retained 90% of the initial activity of nitrilase and could be reused at least four times in vitro with 90% activity. Conclusions An efficient method was developed for the photocontrolled assembly and disassembly of dodecamer nitrilase and for scaffold-free reversible self-assembly of multiple oligomeric enzymes in vivo and in vitro, providing new ideas and methods for immobilization of enzyme without carrier.http://link.springer.com/article/10.1186/s40643-017-0167-3DisassemblyiLIDNitrilasePhotoswitchSelf-assembly
collection DOAJ
language English
format Article
sources DOAJ
author Qiao Yu
Yong Wang
Shengyun Zhao
Yuhong Ren
spellingShingle Qiao Yu
Yong Wang
Shengyun Zhao
Yuhong Ren
Photocontrolled reversible self-assembly of dodecamer nitrilase
Bioresources and Bioprocessing
Disassembly
iLID
Nitrilase
Photoswitch
Self-assembly
author_facet Qiao Yu
Yong Wang
Shengyun Zhao
Yuhong Ren
author_sort Qiao Yu
title Photocontrolled reversible self-assembly of dodecamer nitrilase
title_short Photocontrolled reversible self-assembly of dodecamer nitrilase
title_full Photocontrolled reversible self-assembly of dodecamer nitrilase
title_fullStr Photocontrolled reversible self-assembly of dodecamer nitrilase
title_full_unstemmed Photocontrolled reversible self-assembly of dodecamer nitrilase
title_sort photocontrolled reversible self-assembly of dodecamer nitrilase
publisher SpringerOpen
series Bioresources and Bioprocessing
issn 2197-4365
publishDate 2017-08-01
description Abstract Background Naturally photoswitchable proteins act as a powerful tool for the spatial and temporal control of biological processes by inducing the formation of a photodimerizer. In this study, a method for the precise and reversible inducible self-assembly of dodecamer nitrilase in vivo (in Escherichia coli) and in vitro (in a cell-free solution) was developed by means of the photoswitch-improved light-inducible dimer (iLID) system which could induce protein–protein dimerization. Results Nitrilase was fused with the photoswitch protein AsLOV2-SsrA to achieve the photocontrolled self-assembly of dodecamer nitrilase. The fusion protein self-assembled into a supramolecular assembly when illuminated at 470 nm. Scanning electron microscopy showed that the assembly formed a circular sheet structure. Self-assembly was also induced by light in E. coli. Dynamic light scattering and turbidity assay experiments showed that the assemblies formed within a few seconds under 470-nm light and completely disassembled within 5 min in the dark. Assembly and disassembly could be maintained for at least five cycles. Both in vitro and in vivo, the assemblies retained 90% of the initial activity of nitrilase and could be reused at least four times in vitro with 90% activity. Conclusions An efficient method was developed for the photocontrolled assembly and disassembly of dodecamer nitrilase and for scaffold-free reversible self-assembly of multiple oligomeric enzymes in vivo and in vitro, providing new ideas and methods for immobilization of enzyme without carrier.
topic Disassembly
iLID
Nitrilase
Photoswitch
Self-assembly
url http://link.springer.com/article/10.1186/s40643-017-0167-3
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AT yongwang photocontrolledreversibleselfassemblyofdodecamernitrilase
AT shengyunzhao photocontrolledreversibleselfassemblyofdodecamernitrilase
AT yuhongren photocontrolledreversibleselfassemblyofdodecamernitrilase
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