NBS1 rs2735383 polymorphism is associated with an increased risk of laryngeal carcinoma

Abstract Background Nijmegen breakage syndrome 1 (NBS1), as a key protein in the DNA double-strand breaks (DSBs) repair pathway, plays an important role in maintaining genomic stability. Although single nucleotide polymorphisms (SNPs) in NBS1 have frequently been studied in multiple cancers, the rel...

Full description

Bibliographic Details
Main Authors: Xinmei Hu, Juan Liao, Huiliu Zhao, Feng Chen, Xuefeng Zhu, Jiangheng Li, Qingqing Nong
Format: Article
Language:English
Published: BMC 2018-02-01
Series:BMC Cancer
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12885-018-4078-2
id doaj-5aa8427e839a47be9b4d2961272acb62
record_format Article
spelling doaj-5aa8427e839a47be9b4d2961272acb622020-11-24T22:49:37ZengBMCBMC Cancer1471-24072018-02-011811810.1186/s12885-018-4078-2NBS1 rs2735383 polymorphism is associated with an increased risk of laryngeal carcinomaXinmei Hu0Juan Liao1Huiliu Zhao2Feng Chen3Xuefeng Zhu4Jiangheng Li5Qingqing Nong6School of Public Health, Guangxi Medical UniversitySchool of Public Health, Guangxi Medical UniversityDepartment of Clinical Laboratory, The Affiliated Tumor Hospital of Guangxi Medical UniversityDepartment of Medical Oncology Division, The First Affiliated Hospital of Guangxi Medical UniversitySchool of Public Health, Guangxi Medical UniversitySchool of Public Health, Guangxi Medical UniversitySchool of Public Health, Guangxi Medical UniversityAbstract Background Nijmegen breakage syndrome 1 (NBS1), as a key protein in the DNA double-strand breaks (DSBs) repair pathway, plays an important role in maintaining genomic stability. Although single nucleotide polymorphisms (SNPs) in NBS1 have frequently been studied in multiple cancers, the relationships of two functional NBS1 polymorphisms (rs2735383 and rs1805794) with laryngeal carcinoma are yet unclear. Therefore, in the present study, we performed a case-control study including 342 cases and 345 controls to analyze the associations between two polymorphisms of NBS1 and the risk of laryngeal carcinoma. Methods We used the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method to determine the genotypes of the functional SNPs in NBS1 gene. Results In comparison with the homozygous rs2735383GG genotype, the CC genotype was significantly associated with an increased risk of laryngeal carcinoma (adjusted OR = 1.884, 95%CI = 1.215–2.921). The rs2735383C variant genotypes (GC + CC) conferred a 1.410-fold increased risk of laryngeal carcinoma (adjusted OR = 1.410, 95%CI = 1.004–1.980). Furthermore, when compared to rs2735383GG genotype in laryngeal carcinoma tissues, the combined GC and CC genotypes exerted a significantly lower mRNA level of NBS1 (P = 0.003). In contrast, no significant association was found between rs1805794G > C polymorphism and cancer risk (adjusted OR = 1.074, 95%CI = 0.759–1.518 for GC; adjusted OR = 1.100, 95%CI = 0.678–1.787 for CC; adjusted OR = 1.079, 95%CI = 0.774–1.505 for GC + CC). Conclusions These findings indicate that rs2735383G > C polymorphism in NBS1 may play a crucial role in the development of laryngeal carcinoma.http://link.springer.com/article/10.1186/s12885-018-4078-2NBS1Laryngeal carcinomaPolymorphism
collection DOAJ
language English
format Article
sources DOAJ
author Xinmei Hu
Juan Liao
Huiliu Zhao
Feng Chen
Xuefeng Zhu
Jiangheng Li
Qingqing Nong
spellingShingle Xinmei Hu
Juan Liao
Huiliu Zhao
Feng Chen
Xuefeng Zhu
Jiangheng Li
Qingqing Nong
NBS1 rs2735383 polymorphism is associated with an increased risk of laryngeal carcinoma
BMC Cancer
NBS1
Laryngeal carcinoma
Polymorphism
author_facet Xinmei Hu
Juan Liao
Huiliu Zhao
Feng Chen
Xuefeng Zhu
Jiangheng Li
Qingqing Nong
author_sort Xinmei Hu
title NBS1 rs2735383 polymorphism is associated with an increased risk of laryngeal carcinoma
title_short NBS1 rs2735383 polymorphism is associated with an increased risk of laryngeal carcinoma
title_full NBS1 rs2735383 polymorphism is associated with an increased risk of laryngeal carcinoma
title_fullStr NBS1 rs2735383 polymorphism is associated with an increased risk of laryngeal carcinoma
title_full_unstemmed NBS1 rs2735383 polymorphism is associated with an increased risk of laryngeal carcinoma
title_sort nbs1 rs2735383 polymorphism is associated with an increased risk of laryngeal carcinoma
publisher BMC
series BMC Cancer
issn 1471-2407
publishDate 2018-02-01
description Abstract Background Nijmegen breakage syndrome 1 (NBS1), as a key protein in the DNA double-strand breaks (DSBs) repair pathway, plays an important role in maintaining genomic stability. Although single nucleotide polymorphisms (SNPs) in NBS1 have frequently been studied in multiple cancers, the relationships of two functional NBS1 polymorphisms (rs2735383 and rs1805794) with laryngeal carcinoma are yet unclear. Therefore, in the present study, we performed a case-control study including 342 cases and 345 controls to analyze the associations between two polymorphisms of NBS1 and the risk of laryngeal carcinoma. Methods We used the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method to determine the genotypes of the functional SNPs in NBS1 gene. Results In comparison with the homozygous rs2735383GG genotype, the CC genotype was significantly associated with an increased risk of laryngeal carcinoma (adjusted OR = 1.884, 95%CI = 1.215–2.921). The rs2735383C variant genotypes (GC + CC) conferred a 1.410-fold increased risk of laryngeal carcinoma (adjusted OR = 1.410, 95%CI = 1.004–1.980). Furthermore, when compared to rs2735383GG genotype in laryngeal carcinoma tissues, the combined GC and CC genotypes exerted a significantly lower mRNA level of NBS1 (P = 0.003). In contrast, no significant association was found between rs1805794G > C polymorphism and cancer risk (adjusted OR = 1.074, 95%CI = 0.759–1.518 for GC; adjusted OR = 1.100, 95%CI = 0.678–1.787 for CC; adjusted OR = 1.079, 95%CI = 0.774–1.505 for GC + CC). Conclusions These findings indicate that rs2735383G > C polymorphism in NBS1 may play a crucial role in the development of laryngeal carcinoma.
topic NBS1
Laryngeal carcinoma
Polymorphism
url http://link.springer.com/article/10.1186/s12885-018-4078-2
work_keys_str_mv AT xinmeihu nbs1rs2735383polymorphismisassociatedwithanincreasedriskoflaryngealcarcinoma
AT juanliao nbs1rs2735383polymorphismisassociatedwithanincreasedriskoflaryngealcarcinoma
AT huiliuzhao nbs1rs2735383polymorphismisassociatedwithanincreasedriskoflaryngealcarcinoma
AT fengchen nbs1rs2735383polymorphismisassociatedwithanincreasedriskoflaryngealcarcinoma
AT xuefengzhu nbs1rs2735383polymorphismisassociatedwithanincreasedriskoflaryngealcarcinoma
AT jianghengli nbs1rs2735383polymorphismisassociatedwithanincreasedriskoflaryngealcarcinoma
AT qingqingnong nbs1rs2735383polymorphismisassociatedwithanincreasedriskoflaryngealcarcinoma
_version_ 1725675650360016896