Usefulness of comprehensive targeted multigene panel sequencing for neuromuscular disorders in Korean patients

Abstract Background Multigene panel sequencing (MGPS) is the first‐line option in diagnostic testing for genetically heterogeneous but clinically similar conditions, such as neuromuscular disorders (NMDs). In this study, we aimed to assess the utility of comprehensive NMD MGPS and the need for updat...

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Main Authors: Jihye Park, Hyun Mi Oh, Hye Jung Park, Ah‐Ra Cho, Dong‐Woo Lee, Ja‐Hyun Jang, Dae‐Hyun Jang
Format: Article
Language:English
Published: Wiley 2019-10-01
Series:Molecular Genetics & Genomic Medicine
Subjects:
Online Access:https://doi.org/10.1002/mgg3.947
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spelling doaj-5b8f4aa9a52f431eadd5f1dab5a9aa7f2020-11-24T23:59:51ZengWileyMolecular Genetics & Genomic Medicine2324-92692019-10-01710n/an/a10.1002/mgg3.947Usefulness of comprehensive targeted multigene panel sequencing for neuromuscular disorders in Korean patientsJihye Park0Hyun Mi Oh1Hye Jung Park2Ah‐Ra Cho3Dong‐Woo Lee4Ja‐Hyun Jang5Dae‐Hyun Jang6Department of Rehabilitation Medicine, Eunpyeong St. Mary's Hospital, College of Medicine The Catholic University of Korea Seoul Republic of KoreaDepartment of Rehabilitation Medicine, National Traffic Injury Rehabilitation Hospital, College of Medicine The Catholic University of Korea Seoul Republic of KoreaDepartment of Rehabilitation Medicine, National Traffic Injury Rehabilitation Hospital, College of Medicine The Catholic University of Korea Seoul Republic of KoreaDepartment of Rehabilitation Medicine, Eunpyeong St. Mary's Hospital, College of Medicine The Catholic University of Korea Seoul Republic of KoreaDepartment of Rehabilitation Medicine, Incheon St. Mary’s Hospital College of Medicine The Catholic University of Korea Seoul Republic of KoreaGreen Cross Genome Yongin Republic of KoreaDepartment of Rehabilitation Medicine, Incheon St. Mary’s Hospital College of Medicine The Catholic University of Korea Seoul Republic of KoreaAbstract Background Multigene panel sequencing (MGPS) is the first‐line option in diagnostic testing for genetically heterogeneous but clinically similar conditions, such as neuromuscular disorders (NMDs). In this study, we aimed to assess the utility of comprehensive NMD MGPS and the need for updated panels. Methods All patients were analyzed by either of two versions of the NMD MGPS and by chromosomal microarray and karyotype testing. Four patients with negative NMD MGPS results underwent whole exome sequencing. Results In total, 91 patients were enrolled, and a genetic diagnosis was made in 36 (39.6%); of these, 33 were diagnosed by the comprehensive NMD MGPS, two were confirmed by chromosomal microarray, and one was diagnosed by whole exome sequencing. For MGPS, the diagnostic yield of Version 2 (19/52; 36.5%) was a little higher than that of Version 1 (14/39; 35.9%), and one gene identified in Version 2 was not included in Version 1. A total of 36 definitive and nine possible causative variants were identified, of which 17 were novel. Conclusion A more comprehensive panel for NMD MGPS can improve the diagnostic efficiency in genetic testing. The rapid discovery of new disease‐causing genes over recent years necessitates updates to existing gene panels.https://doi.org/10.1002/mgg3.947Neuromuscular disorderNext‐generation sequencingTargeted multigene panel sequencingWhole exome sequencing
collection DOAJ
language English
format Article
sources DOAJ
author Jihye Park
Hyun Mi Oh
Hye Jung Park
Ah‐Ra Cho
Dong‐Woo Lee
Ja‐Hyun Jang
Dae‐Hyun Jang
spellingShingle Jihye Park
Hyun Mi Oh
Hye Jung Park
Ah‐Ra Cho
Dong‐Woo Lee
Ja‐Hyun Jang
Dae‐Hyun Jang
Usefulness of comprehensive targeted multigene panel sequencing for neuromuscular disorders in Korean patients
Molecular Genetics & Genomic Medicine
Neuromuscular disorder
Next‐generation sequencing
Targeted multigene panel sequencing
Whole exome sequencing
author_facet Jihye Park
Hyun Mi Oh
Hye Jung Park
Ah‐Ra Cho
Dong‐Woo Lee
Ja‐Hyun Jang
Dae‐Hyun Jang
author_sort Jihye Park
title Usefulness of comprehensive targeted multigene panel sequencing for neuromuscular disorders in Korean patients
title_short Usefulness of comprehensive targeted multigene panel sequencing for neuromuscular disorders in Korean patients
title_full Usefulness of comprehensive targeted multigene panel sequencing for neuromuscular disorders in Korean patients
title_fullStr Usefulness of comprehensive targeted multigene panel sequencing for neuromuscular disorders in Korean patients
title_full_unstemmed Usefulness of comprehensive targeted multigene panel sequencing for neuromuscular disorders in Korean patients
title_sort usefulness of comprehensive targeted multigene panel sequencing for neuromuscular disorders in korean patients
publisher Wiley
series Molecular Genetics & Genomic Medicine
issn 2324-9269
publishDate 2019-10-01
description Abstract Background Multigene panel sequencing (MGPS) is the first‐line option in diagnostic testing for genetically heterogeneous but clinically similar conditions, such as neuromuscular disorders (NMDs). In this study, we aimed to assess the utility of comprehensive NMD MGPS and the need for updated panels. Methods All patients were analyzed by either of two versions of the NMD MGPS and by chromosomal microarray and karyotype testing. Four patients with negative NMD MGPS results underwent whole exome sequencing. Results In total, 91 patients were enrolled, and a genetic diagnosis was made in 36 (39.6%); of these, 33 were diagnosed by the comprehensive NMD MGPS, two were confirmed by chromosomal microarray, and one was diagnosed by whole exome sequencing. For MGPS, the diagnostic yield of Version 2 (19/52; 36.5%) was a little higher than that of Version 1 (14/39; 35.9%), and one gene identified in Version 2 was not included in Version 1. A total of 36 definitive and nine possible causative variants were identified, of which 17 were novel. Conclusion A more comprehensive panel for NMD MGPS can improve the diagnostic efficiency in genetic testing. The rapid discovery of new disease‐causing genes over recent years necessitates updates to existing gene panels.
topic Neuromuscular disorder
Next‐generation sequencing
Targeted multigene panel sequencing
Whole exome sequencing
url https://doi.org/10.1002/mgg3.947
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