A Nosocomial Respiratory Infection Outbreak of Carbapenem-Resistant Escherichia coli ST131 With Multiple Transmissible blaKPC–2 Carrying Plasmids

Escherichia coli sequence type 131 (ST131) is well known for its multidrug resistance profile. Carbapenems have been considered the treatment of choice for E. coli ST131 infections, and resistance to carbapenems is emerging due to the acquisition of carbapenemase-encoding genes. In this study, 45 ca...

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Main Authors: Lin Gong, Na Tang, Dongke Chen, Kaiwen Sun, Ruiting Lan, Wen Zhang, Haijian Zhou, Min Yuan, Xia Chen, Xiaofei Zhao, Jie Che, Xuemei Bai, Yunfei Zhang, Hongtao Xu, Timothy R. Walsh, Jinxing Lu, Jianguo Xu, Juan Li, Jie Feng
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-09-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fmicb.2020.02068/full
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language English
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author Lin Gong
Lin Gong
Na Tang
Na Tang
Dongke Chen
Kaiwen Sun
Ruiting Lan
Wen Zhang
Haijian Zhou
Min Yuan
Xia Chen
Xiaofei Zhao
Jie Che
Xuemei Bai
Yunfei Zhang
Hongtao Xu
Timothy R. Walsh
Jinxing Lu
Jianguo Xu
Juan Li
Jie Feng
spellingShingle Lin Gong
Lin Gong
Na Tang
Na Tang
Dongke Chen
Kaiwen Sun
Ruiting Lan
Wen Zhang
Haijian Zhou
Min Yuan
Xia Chen
Xiaofei Zhao
Jie Che
Xuemei Bai
Yunfei Zhang
Hongtao Xu
Timothy R. Walsh
Jinxing Lu
Jianguo Xu
Juan Li
Jie Feng
A Nosocomial Respiratory Infection Outbreak of Carbapenem-Resistant Escherichia coli ST131 With Multiple Transmissible blaKPC–2 Carrying Plasmids
Frontiers in Microbiology
blaKPC–2
Escherichia coli ST131
outbreak
respiratory infection
transmissible plasmids
author_facet Lin Gong
Lin Gong
Na Tang
Na Tang
Dongke Chen
Kaiwen Sun
Ruiting Lan
Wen Zhang
Haijian Zhou
Min Yuan
Xia Chen
Xiaofei Zhao
Jie Che
Xuemei Bai
Yunfei Zhang
Hongtao Xu
Timothy R. Walsh
Jinxing Lu
Jianguo Xu
Juan Li
Jie Feng
author_sort Lin Gong
title A Nosocomial Respiratory Infection Outbreak of Carbapenem-Resistant Escherichia coli ST131 With Multiple Transmissible blaKPC–2 Carrying Plasmids
title_short A Nosocomial Respiratory Infection Outbreak of Carbapenem-Resistant Escherichia coli ST131 With Multiple Transmissible blaKPC–2 Carrying Plasmids
title_full A Nosocomial Respiratory Infection Outbreak of Carbapenem-Resistant Escherichia coli ST131 With Multiple Transmissible blaKPC–2 Carrying Plasmids
title_fullStr A Nosocomial Respiratory Infection Outbreak of Carbapenem-Resistant Escherichia coli ST131 With Multiple Transmissible blaKPC–2 Carrying Plasmids
title_full_unstemmed A Nosocomial Respiratory Infection Outbreak of Carbapenem-Resistant Escherichia coli ST131 With Multiple Transmissible blaKPC–2 Carrying Plasmids
title_sort nosocomial respiratory infection outbreak of carbapenem-resistant escherichia coli st131 with multiple transmissible blakpc–2 carrying plasmids
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2020-09-01
description Escherichia coli sequence type 131 (ST131) is well known for its multidrug resistance profile. Carbapenems have been considered the treatment of choice for E. coli ST131 infections, and resistance to carbapenems is emerging due to the acquisition of carbapenemase-encoding genes. In this study, 45 carbapenem-resistant E. coli strains were collected in a hospital. The resistance mechanisms, plasmid profiles, and genetic relatedness of these strains were determined. Phylogenetic relationships between these strains were assessed by molecular profiling and aligned with patient clinical details. The genetic context of blaKPC–2 was analyzed to trace the potential dissemination of blaKPC–2. The 45 carbapenem-resistant E. coli ST131 strains were closely related. Initially prevalent only in a single ward, ST131 subsequently spread to other ward, resulting in a respiratory infection outbreak of carbapenem-resistant E. coli ST131. Eight of the 30 patients died within 28 days of the first isolation of E. coli ST131. The blaKPC–2-positive plasmid profiles suggest that the carbapenem resistance was due to the acquisition by E. coli ST131 of transmissible plasmids pE0272_KPC and pE0171_KPC carrying blaKPC–2. Additionally, diverse multidrug resistance elements were transferred and rearranged between these plasmids mediated by IS26. Our research indicates that clinical attention should be paid to the importance of E. coli ST131 in respiratory infections and the spread of blaKPC-carrying E. coli ST131.
topic blaKPC–2
Escherichia coli ST131
outbreak
respiratory infection
transmissible plasmids
url https://www.frontiersin.org/article/10.3389/fmicb.2020.02068/full
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spelling doaj-5cd5d2a09e9e4de1b270592ad806c3092020-11-25T03:48:07ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2020-09-011110.3389/fmicb.2020.02068548804A Nosocomial Respiratory Infection Outbreak of Carbapenem-Resistant Escherichia coli ST131 With Multiple Transmissible blaKPC–2 Carrying PlasmidsLin Gong0Lin Gong1Na Tang2Na Tang3Dongke Chen4Kaiwen Sun5Ruiting Lan6Wen Zhang7Haijian Zhou8Min Yuan9Xia Chen10Xiaofei Zhao11Jie Che12Xuemei Bai13Yunfei Zhang14Hongtao Xu15Timothy R. Walsh16Jinxing Lu17Jianguo Xu18Juan Li19Jie Feng20State Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Disease, National Institute for Communicable Disease Control and Prevention, China CDC, Beijing, ChinaWuhan Centers for Disease Prevention and Control, Wuhan, ChinaState Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, ChinaCollege of Life Science, University of Chinese Academy of Sciences, Beijing, ChinaDepartment of Laboratory Medicine, Beijing Hospital, National Center of Gerontology, Beijing, ChinaState Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, ChinaSchool of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW, AustraliaState Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Disease, National Institute for Communicable Disease Control and Prevention, China CDC, Beijing, ChinaState Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Disease, National Institute for Communicable Disease Control and Prevention, China CDC, Beijing, ChinaState Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Disease, National Institute for Communicable Disease Control and Prevention, China CDC, Beijing, ChinaState Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Disease, National Institute for Communicable Disease Control and Prevention, China CDC, Beijing, ChinaState Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Disease, National Institute for Communicable Disease Control and Prevention, China CDC, Beijing, ChinaState Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Disease, National Institute for Communicable Disease Control and Prevention, China CDC, Beijing, ChinaState Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Disease, National Institute for Communicable Disease Control and Prevention, China CDC, Beijing, ChinaState Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Disease, National Institute for Communicable Disease Control and Prevention, China CDC, Beijing, ChinaDepartment of Laboratory Medicine, Beijing Hospital, National Center of Gerontology, Beijing, ChinaDepartment of Medical, Microbiology, School of Medicine, Cardiff University, Cardiff, United KingdomState Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Disease, National Institute for Communicable Disease Control and Prevention, China CDC, Beijing, ChinaState Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Disease, National Institute for Communicable Disease Control and Prevention, China CDC, Beijing, ChinaState Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Disease, National Institute for Communicable Disease Control and Prevention, China CDC, Beijing, ChinaState Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, ChinaEscherichia coli sequence type 131 (ST131) is well known for its multidrug resistance profile. Carbapenems have been considered the treatment of choice for E. coli ST131 infections, and resistance to carbapenems is emerging due to the acquisition of carbapenemase-encoding genes. In this study, 45 carbapenem-resistant E. coli strains were collected in a hospital. The resistance mechanisms, plasmid profiles, and genetic relatedness of these strains were determined. Phylogenetic relationships between these strains were assessed by molecular profiling and aligned with patient clinical details. The genetic context of blaKPC–2 was analyzed to trace the potential dissemination of blaKPC–2. The 45 carbapenem-resistant E. coli ST131 strains were closely related. Initially prevalent only in a single ward, ST131 subsequently spread to other ward, resulting in a respiratory infection outbreak of carbapenem-resistant E. coli ST131. Eight of the 30 patients died within 28 days of the first isolation of E. coli ST131. The blaKPC–2-positive plasmid profiles suggest that the carbapenem resistance was due to the acquisition by E. coli ST131 of transmissible plasmids pE0272_KPC and pE0171_KPC carrying blaKPC–2. Additionally, diverse multidrug resistance elements were transferred and rearranged between these plasmids mediated by IS26. Our research indicates that clinical attention should be paid to the importance of E. coli ST131 in respiratory infections and the spread of blaKPC-carrying E. coli ST131.https://www.frontiersin.org/article/10.3389/fmicb.2020.02068/fullblaKPC–2Escherichia coli ST131outbreakrespiratory infectiontransmissible plasmids