PedWiz: A web-based tool for pedigree informatics

A novel web-based tool PedWiz that pipelines the informatics process for pedigree data is introduced. PedWiz is designed to assist researchers in the analysis of pedigree data. It provides a convenient tool for pedigree informatics: descriptive statistics, relative pairs, genetic similarity coeffi...

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Main Authors: Yeunjoo E. Song, Robert C Elston
Format: Article
Language:English
Published: Frontiers Media S.A. 2013-09-01
Series:Frontiers in Genetics
Subjects:
Online Access:http://journal.frontiersin.org/Journal/10.3389/fgene.2013.00189/full
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spelling doaj-5ce856d8b38b4700b34e6a2621e5d42b2020-11-24T23:08:04ZengFrontiers Media S.A.Frontiers in Genetics1664-80212013-09-01410.3389/fgene.2013.0018961516PedWiz: A web-based tool for pedigree informaticsYeunjoo E. Song0Robert C Elston1Case Western Reserve UniversityCase Western Reserve UniversityA novel web-based tool PedWiz that pipelines the informatics process for pedigree data is introduced. PedWiz is designed to assist researchers in the analysis of pedigree data. It provides a convenient tool for pedigree informatics: descriptive statistics, relative pairs, genetic similarity coefficients, the variance-covariance matrix for three estimated coefficients of allele identical-by-descent sharing as well as mean allele sharing, a plot of the pedigree structures, and a visualization of the identity coefficients. With a renewed interest in linkage and other family-based methods, PedWiz will be a valuable tool for the analysis of family data.http://journal.frontiersin.org/Journal/10.3389/fgene.2013.00189/fullInformaticspedigreeidentity-by-descentgenetic similarityrelative pairsfamily data
collection DOAJ
language English
format Article
sources DOAJ
author Yeunjoo E. Song
Robert C Elston
spellingShingle Yeunjoo E. Song
Robert C Elston
PedWiz: A web-based tool for pedigree informatics
Frontiers in Genetics
Informatics
pedigree
identity-by-descent
genetic similarity
relative pairs
family data
author_facet Yeunjoo E. Song
Robert C Elston
author_sort Yeunjoo E. Song
title PedWiz: A web-based tool for pedigree informatics
title_short PedWiz: A web-based tool for pedigree informatics
title_full PedWiz: A web-based tool for pedigree informatics
title_fullStr PedWiz: A web-based tool for pedigree informatics
title_full_unstemmed PedWiz: A web-based tool for pedigree informatics
title_sort pedwiz: a web-based tool for pedigree informatics
publisher Frontiers Media S.A.
series Frontiers in Genetics
issn 1664-8021
publishDate 2013-09-01
description A novel web-based tool PedWiz that pipelines the informatics process for pedigree data is introduced. PedWiz is designed to assist researchers in the analysis of pedigree data. It provides a convenient tool for pedigree informatics: descriptive statistics, relative pairs, genetic similarity coefficients, the variance-covariance matrix for three estimated coefficients of allele identical-by-descent sharing as well as mean allele sharing, a plot of the pedigree structures, and a visualization of the identity coefficients. With a renewed interest in linkage and other family-based methods, PedWiz will be a valuable tool for the analysis of family data.
topic Informatics
pedigree
identity-by-descent
genetic similarity
relative pairs
family data
url http://journal.frontiersin.org/Journal/10.3389/fgene.2013.00189/full
work_keys_str_mv AT yeunjooesong pedwizawebbasedtoolforpedigreeinformatics
AT robertcelston pedwizawebbasedtoolforpedigreeinformatics
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