Near Real-Time Computer Assisted Surgery for Brain Shift Correction Using Biomechanical Models

Conventional image-guided neurosurgery relies on preoperative images to provide surgical navigational information and visualization. However, these images are no longer accurate once the skull has been opened and brain shift occurs. To account for changes in the shape of the brain caused by mechanic...

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Main Authors: Kay Sun, Thomas S. Pheiffer, Amber L. Simpson, Jared A. Weis, Reid C. Thompson, Michael I. Miga
Format: Article
Language:English
Published: IEEE 2014-01-01
Series:IEEE Journal of Translational Engineering in Health and Medicine
Online Access:https://ieeexplore.ieee.org/document/6823628/
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spelling doaj-5d4eef501adc46ac8d4fe0381269ff002021-03-29T18:38:23ZengIEEEIEEE Journal of Translational Engineering in Health and Medicine2168-23722014-01-01211310.1109/JTEHM.2014.23276286823628Near Real-Time Computer Assisted Surgery for Brain Shift Correction Using Biomechanical ModelsKay Sun0Thomas S. Pheiffer1Amber L. Simpson2Jared A. Weis3Reid C. Thompson4Michael I. Miga5Department of Biomedical Engineering, Vanderbilt University, Nashville, TN, USADepartment of Biomedical Engineering, Vanderbilt University, Nashville, TN, USADepartment of Biomedical Engineering, Vanderbilt University, Nashville, TN, USADepartment of Biomedical Engineering, Vanderbilt University, Nashville, TN, USADepartment of Neurological Surgery, Vanderbilt University Medical Center, Nashville, TN, USADepartment of Biomedical Engineering, Vanderbilt University, Nashville, TN, USAConventional image-guided neurosurgery relies on preoperative images to provide surgical navigational information and visualization. However, these images are no longer accurate once the skull has been opened and brain shift occurs. To account for changes in the shape of the brain caused by mechanical (e.g., gravity-induced deformations) and physiological effects (e.g., hyperosmotic drug-induced shrinking, or edema-induced swelling), updated images of the brain must be provided to the neuronavigation system in a timely manner for practical use in the operating room. In this paper, a novel preoperative and intraoperative computational processing pipeline for near real-time brain shift correction in the operating room was developed to automate and simplify the processing steps. Preoperatively, a computer model of the patient's brain with a subsequent atlas of potential deformations due to surgery is generated from diagnostic image volumes. In the case of interim gross changes between diagnosis, and surgery when reimaging is necessary, our preoperative pipeline can be generated within one day of surgery. Intraoperatively, sparse data measuring the cortical brain surface is collected using an optically tracked portable laser range scanner. These data are then used to guide an inverse modeling framework whereby full volumetric brain deformations are reconstructed from precomputed atlas solutions to rapidly match intraoperative cortical surface shift measurements. Once complete, the volumetric displacement field is used to update, i.e., deform, preoperative brain images to their intraoperative shifted state. In this paper, five surgical cases were analyzed with respect to the computational pipeline and workflow timing. With respect to postcortical surface data acquisition, the approximate execution time was 4.5 min. The total update process which included positioning the scanner, data acquisition, inverse model processing, and image deforming was ~ 11-13 min. In addition, easily implemented hardware, software, and workflow processes were identified for improved performance in the near future.https://ieeexplore.ieee.org/document/6823628/
collection DOAJ
language English
format Article
sources DOAJ
author Kay Sun
Thomas S. Pheiffer
Amber L. Simpson
Jared A. Weis
Reid C. Thompson
Michael I. Miga
spellingShingle Kay Sun
Thomas S. Pheiffer
Amber L. Simpson
Jared A. Weis
Reid C. Thompson
Michael I. Miga
Near Real-Time Computer Assisted Surgery for Brain Shift Correction Using Biomechanical Models
IEEE Journal of Translational Engineering in Health and Medicine
author_facet Kay Sun
Thomas S. Pheiffer
Amber L. Simpson
Jared A. Weis
Reid C. Thompson
Michael I. Miga
author_sort Kay Sun
title Near Real-Time Computer Assisted Surgery for Brain Shift Correction Using Biomechanical Models
title_short Near Real-Time Computer Assisted Surgery for Brain Shift Correction Using Biomechanical Models
title_full Near Real-Time Computer Assisted Surgery for Brain Shift Correction Using Biomechanical Models
title_fullStr Near Real-Time Computer Assisted Surgery for Brain Shift Correction Using Biomechanical Models
title_full_unstemmed Near Real-Time Computer Assisted Surgery for Brain Shift Correction Using Biomechanical Models
title_sort near real-time computer assisted surgery for brain shift correction using biomechanical models
publisher IEEE
series IEEE Journal of Translational Engineering in Health and Medicine
issn 2168-2372
publishDate 2014-01-01
description Conventional image-guided neurosurgery relies on preoperative images to provide surgical navigational information and visualization. However, these images are no longer accurate once the skull has been opened and brain shift occurs. To account for changes in the shape of the brain caused by mechanical (e.g., gravity-induced deformations) and physiological effects (e.g., hyperosmotic drug-induced shrinking, or edema-induced swelling), updated images of the brain must be provided to the neuronavigation system in a timely manner for practical use in the operating room. In this paper, a novel preoperative and intraoperative computational processing pipeline for near real-time brain shift correction in the operating room was developed to automate and simplify the processing steps. Preoperatively, a computer model of the patient's brain with a subsequent atlas of potential deformations due to surgery is generated from diagnostic image volumes. In the case of interim gross changes between diagnosis, and surgery when reimaging is necessary, our preoperative pipeline can be generated within one day of surgery. Intraoperatively, sparse data measuring the cortical brain surface is collected using an optically tracked portable laser range scanner. These data are then used to guide an inverse modeling framework whereby full volumetric brain deformations are reconstructed from precomputed atlas solutions to rapidly match intraoperative cortical surface shift measurements. Once complete, the volumetric displacement field is used to update, i.e., deform, preoperative brain images to their intraoperative shifted state. In this paper, five surgical cases were analyzed with respect to the computational pipeline and workflow timing. With respect to postcortical surface data acquisition, the approximate execution time was 4.5 min. The total update process which included positioning the scanner, data acquisition, inverse model processing, and image deforming was ~ 11-13 min. In addition, easily implemented hardware, software, and workflow processes were identified for improved performance in the near future.
url https://ieeexplore.ieee.org/document/6823628/
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