Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data.
The narrow genetic base and limited genetic information on Arachis species have hindered the process of marker-assisted selection of peanut cultivars. However, recent developments in sequencing technologies have expanded opportunities to exploit genetic resources, and at lower cost. To use the genet...
Main Authors: | Ratan Chopra, Gloria Burow, Andrew Farmer, Joann Mudge, Charles E Simpson, Mark D Burow |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2014-01-01
|
Series: | PLoS ONE |
Online Access: | http://europepmc.org/articles/PMC4281230?pdf=render |
Similar Items
-
Transcriptome Sequencing of Diverse Peanut (Arachis) Wild Species and the Cultivated Species Reveals a Wealth of Untapped Genetic Variability
by: Ratan Chopra, et al.
Published: (2016-12-01) -
Diallel Anaysis of Oil Production Components in Peanut (Arachis hypogaea L.)
by: Jeffrey N. Wilson, et al.
Published: (2013-01-01) -
Identification and characterization of aquaporin genes in Arachis duranensis and Arachis ipaensis genomes, the diploid progenitors of peanut
by: S. M. Shivaraj, et al.
Published: (2019-03-01) -
A high-density genetic map of <it>Arachis duranensis</it>, a diploid ancestor of cultivated peanut
by: Nagy Ervin D, et al.
Published: (2012-09-01) -
Sparse Tensor Decomposition for Haplotype Assembly of Diploids and Polyploids
by: Abolfazl Hashemi, et al.
Published: (2018-03-01)