BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs [v1; ref status: indexed, http://f1000r.es/2ut]

BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs [v1; ref status: indexed, http://f1000r.es/2ut]

Summary: The DAGViewer BioJS component is a reusable JavaScript component made available as part of the BioJS project and intended to be used to display graphs of structured data, with a particular emphasis on Directed Acyclic Graphs (DAGs). It enables users to embed representations of graphs of dat...

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Bibliographic Details
Main Authors: Alexis Kalderimis, Radek Stepan, Julie Sullivan, Rachel Lyne, Michael Lyne, Gos Micklem
Format: Article
Language:English
Published: F1000 Research Ltd 2014-02-01
Series:F1000Research
Subjects:
Bioinformatics
Online Access:http://f1000research.com/articles/3-51/v1
id doaj-5e30f2cea6294fe9b16ecad068c0ada4
record_format Article
spelling doaj-5e30f2cea6294fe9b16ecad068c0ada42020-11-25T03:31:10ZengF1000 Research LtdF1000Research2046-14022014-02-01310.12688/f1000research.3-51.v13701BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs [v1; ref status: indexed, http://f1000r.es/2ut]Alexis Kalderimis0Radek Stepan1Julie Sullivan2Rachel Lyne3Michael Lyne4Gos Micklem5Department of Genetics and Cambridge Systems Biology Centre, Cambridge University, Cambridge, CB2 3EH, UKDepartment of Genetics and Cambridge Systems Biology Centre, Cambridge University, Cambridge, CB2 3EH, UKDepartment of Genetics and Cambridge Systems Biology Centre, Cambridge University, Cambridge, CB2 3EH, UKDepartment of Genetics and Cambridge Systems Biology Centre, Cambridge University, Cambridge, CB2 3EH, UKDepartment of Genetics and Cambridge Systems Biology Centre, Cambridge University, Cambridge, CB2 3EH, UKDepartment of Genetics and Cambridge Systems Biology Centre, Cambridge University, Cambridge, CB2 3EH, UKSummary: The DAGViewer BioJS component is a reusable JavaScript component made available as part of the BioJS project and intended to be used to display graphs of structured data, with a particular emphasis on Directed Acyclic Graphs (DAGs). It enables users to embed representations of graphs of data, such as ontologies or phylogenetic trees, in hyper-text documents (HTML). This component is generic, since it is capable (given the appropriate configuration) of displaying any kind of data that is organised as a graph. The features of this component which are useful for examining and filtering large and complex graphs are described. Availability: http://github.com/alexkalderimis/dag-viewer-biojs; http://github.com/biojs/biojs; http://dx.doi.org/10.5281/zenodo.8303.http://f1000research.com/articles/3-51/v1Bioinformatics
collection DOAJ
language English
format Article
sources DOAJ
author Alexis Kalderimis
Radek Stepan
Julie Sullivan
Rachel Lyne
Michael Lyne
Gos Micklem
spellingShingle Alexis Kalderimis
Radek Stepan
Julie Sullivan
Rachel Lyne
Michael Lyne
Gos Micklem
BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs [v1; ref status: indexed, http://f1000r.es/2ut]
F1000Research
Bioinformatics
author_facet Alexis Kalderimis
Radek Stepan
Julie Sullivan
Rachel Lyne
Michael Lyne
Gos Micklem
author_sort Alexis Kalderimis
title BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs [v1; ref status: indexed, http://f1000r.es/2ut]
title_short BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs [v1; ref status: indexed, http://f1000r.es/2ut]
title_full BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs [v1; ref status: indexed, http://f1000r.es/2ut]
title_fullStr BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs [v1; ref status: indexed, http://f1000r.es/2ut]
title_full_unstemmed BioJS DAGViewer: A reusable JavaScript component for displaying directed graphs [v1; ref status: indexed, http://f1000r.es/2ut]
title_sort biojs dagviewer: a reusable javascript component for displaying directed graphs [v1; ref status: indexed, http://f1000r.es/2ut]
publisher F1000 Research Ltd
series F1000Research
issn 2046-1402
publishDate 2014-02-01
description Summary: The DAGViewer BioJS component is a reusable JavaScript component made available as part of the BioJS project and intended to be used to display graphs of structured data, with a particular emphasis on Directed Acyclic Graphs (DAGs). It enables users to embed representations of graphs of data, such as ontologies or phylogenetic trees, in hyper-text documents (HTML). This component is generic, since it is capable (given the appropriate configuration) of displaying any kind of data that is organised as a graph. The features of this component which are useful for examining and filtering large and complex graphs are described. Availability: http://github.com/alexkalderimis/dag-viewer-biojs; http://github.com/biojs/biojs; http://dx.doi.org/10.5281/zenodo.8303.
topic Bioinformatics
url http://f1000research.com/articles/3-51/v1
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