Association of BLK and BANK1 Polymorphisms and Interactions With Rheumatoid Arthritis in a Latin-American Population

IntroductionBLK has been identified as a risk factor to rheumatoid arthritis (RA) primarily in Asian or European-derived populations. However, this finding has not been evaluated in other populations such as Latin-Americans, except for Colombians. On the other hand, BANK1 single nucleotide variants...

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Main Authors: Julian Ramírez-Bello, José M. Fragoso, Isidro Alemán-Ávila, Silvia Jiménez-Morales, Alma D. Campos-Parra, Rosa Elda Barbosa-Cobos, José Moreno
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-02-01
Series:Frontiers in Genetics
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fgene.2020.00058/full
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spelling doaj-5f817949ff624c1387fe3990b0075bd32020-11-25T03:48:44ZengFrontiers Media S.A.Frontiers in Genetics1664-80212020-02-011110.3389/fgene.2020.00058473757Association of BLK and BANK1 Polymorphisms and Interactions With Rheumatoid Arthritis in a Latin-American PopulationJulian Ramírez-Bello0José M. Fragoso1Isidro Alemán-Ávila2Silvia Jiménez-Morales3Alma D. Campos-Parra4Rosa Elda Barbosa-Cobos5José Moreno6Unidad de Investigación, Hospital Juárez de México, Mexico City, MexicoLaboratorio de Biología Molecular, Instituto Nacional de Cardiología, Mexico City, MexicoUnidad de Investigación, Hospital Juárez de México, Mexico City, MexicoLaboratorio de Genómica del Cáncer, Instituto Nacional de Medicina Genómica, Mexico City, MexicoLaboratorio de Genómica, Instituto Nacional de Cancerología, Mexico City, MexicoServicio de Reumatología, Hospital Juárez de México, Mexico City, MexicoDirección de Investigación, Hospital Juárez de México, Mexico City, MexicoIntroductionBLK has been identified as a risk factor to rheumatoid arthritis (RA) primarily in Asian or European-derived populations. However, this finding has not been evaluated in other populations such as Latin-Americans, except for Colombians. On the other hand, BANK1 single nucleotide variants (SNVs) have been scarcely studied in RA patients.ObjectiveThe aim of this study was to determine whether the BLK rs2736340T/C, rs13277113A/G, and BANK1 rs10516487G/A (R61H) and rs3733197G/A (A383T) polymorphisms are risk factors to RA in a sample of patients from Central Mexico.Materials and MethodsWe studied 957 women; 487 controls and 470 patients with RA by means of a TaqMan® SNP genotyping assay with fluorescent probes for the BLK rs13277113A/G, rs2736340T/C and BANK1 10516487G/A (R61H) and rs3733197G/A (A383T) variants.ResultThe BLK rs2736340T/C and rs13277113A/G variants were associated with risk for RA: C vs T; OR 1.39, p = 0.001, and G vs A; OR 1.37, p = 0.004, respectively. In addition, there was also an association between BANK1 R61H and RA: A vs G; OR 1.49, p = 0.003, but no with BANK1 A383T. We also identified an interaction significant between genotypes of BLK rs2736340T/C-BANK1 rs10516487G/A and RA: OR 1.65, p = 0.0001.ConclusionsOur data suggest that both BLK and BANK1 confer susceptibility to RA in Mexican patients. The individual association of BANK1 rs1054857G/A with RA had not been previously reported in a particular population (except for pooled patients from several countries), therefore, our study presents the first evidence of association between this BANK1 variant and RA.https://www.frontiersin.org/article/10.3389/fgene.2020.00058/fullrheumatoid arthritissingle nucleotide variantsgene interactionsusceptibilityassociation
collection DOAJ
language English
format Article
sources DOAJ
author Julian Ramírez-Bello
José M. Fragoso
Isidro Alemán-Ávila
Silvia Jiménez-Morales
Alma D. Campos-Parra
Rosa Elda Barbosa-Cobos
José Moreno
spellingShingle Julian Ramírez-Bello
José M. Fragoso
Isidro Alemán-Ávila
Silvia Jiménez-Morales
Alma D. Campos-Parra
Rosa Elda Barbosa-Cobos
José Moreno
Association of BLK and BANK1 Polymorphisms and Interactions With Rheumatoid Arthritis in a Latin-American Population
Frontiers in Genetics
rheumatoid arthritis
single nucleotide variants
gene interaction
susceptibility
association
author_facet Julian Ramírez-Bello
José M. Fragoso
Isidro Alemán-Ávila
Silvia Jiménez-Morales
Alma D. Campos-Parra
Rosa Elda Barbosa-Cobos
José Moreno
author_sort Julian Ramírez-Bello
title Association of BLK and BANK1 Polymorphisms and Interactions With Rheumatoid Arthritis in a Latin-American Population
title_short Association of BLK and BANK1 Polymorphisms and Interactions With Rheumatoid Arthritis in a Latin-American Population
title_full Association of BLK and BANK1 Polymorphisms and Interactions With Rheumatoid Arthritis in a Latin-American Population
title_fullStr Association of BLK and BANK1 Polymorphisms and Interactions With Rheumatoid Arthritis in a Latin-American Population
title_full_unstemmed Association of BLK and BANK1 Polymorphisms and Interactions With Rheumatoid Arthritis in a Latin-American Population
title_sort association of blk and bank1 polymorphisms and interactions with rheumatoid arthritis in a latin-american population
publisher Frontiers Media S.A.
series Frontiers in Genetics
issn 1664-8021
publishDate 2020-02-01
description IntroductionBLK has been identified as a risk factor to rheumatoid arthritis (RA) primarily in Asian or European-derived populations. However, this finding has not been evaluated in other populations such as Latin-Americans, except for Colombians. On the other hand, BANK1 single nucleotide variants (SNVs) have been scarcely studied in RA patients.ObjectiveThe aim of this study was to determine whether the BLK rs2736340T/C, rs13277113A/G, and BANK1 rs10516487G/A (R61H) and rs3733197G/A (A383T) polymorphisms are risk factors to RA in a sample of patients from Central Mexico.Materials and MethodsWe studied 957 women; 487 controls and 470 patients with RA by means of a TaqMan® SNP genotyping assay with fluorescent probes for the BLK rs13277113A/G, rs2736340T/C and BANK1 10516487G/A (R61H) and rs3733197G/A (A383T) variants.ResultThe BLK rs2736340T/C and rs13277113A/G variants were associated with risk for RA: C vs T; OR 1.39, p = 0.001, and G vs A; OR 1.37, p = 0.004, respectively. In addition, there was also an association between BANK1 R61H and RA: A vs G; OR 1.49, p = 0.003, but no with BANK1 A383T. We also identified an interaction significant between genotypes of BLK rs2736340T/C-BANK1 rs10516487G/A and RA: OR 1.65, p = 0.0001.ConclusionsOur data suggest that both BLK and BANK1 confer susceptibility to RA in Mexican patients. The individual association of BANK1 rs1054857G/A with RA had not been previously reported in a particular population (except for pooled patients from several countries), therefore, our study presents the first evidence of association between this BANK1 variant and RA.
topic rheumatoid arthritis
single nucleotide variants
gene interaction
susceptibility
association
url https://www.frontiersin.org/article/10.3389/fgene.2020.00058/full
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