Genomic mutation profiling using liquid biopsy in Korean patients with prostate cancer: Circulating tumor DNA mutation predicts the development of castration resistance

Purpose: To investigate germline and somatic mutation profiles in Korean patients with prostate cancer using liquid biopsy and solid tissue testing and to evaluate the prognostic value of circulating tumor DNA (ctDNA) in predicting castration resistance in patients with metastatic hormone-sensitive...

Full description

Bibliographic Details
Main Authors: Jiwoong Yu, Eunhae Cho, Joongwon Choi, Joung Eun Lim, Junnam Lee, Minyong Kang, Hyun Hwan Sung, Byong Chang Jeong, Seong Il Seo, Seong Soo Jeon, Hyun Moo Lee, Hwang Gyun Jeon
Format: Article
Language:English
Published: Korean Urological Association 2021-03-01
Series:Investigative and Clinical Urology
Subjects:
Online Access:https://www.icurology.org/pdf/10.4111/icu.20200406
id doaj-6045e84899b44ecdab745f0eac72a2d6
record_format Article
spelling doaj-6045e84899b44ecdab745f0eac72a2d62021-03-11T08:42:57ZengKorean Urological AssociationInvestigative and Clinical Urology2466-04932466-054X2021-03-0162222423210.4111/icu.20200406Genomic mutation profiling using liquid biopsy in Korean patients with prostate cancer: Circulating tumor DNA mutation predicts the development of castration resistanceJiwoong Yu 0https://orcid.org/0000-0003-2147-2915Eunhae Cho 1https://orcid.org/0000-0003-3056-0001Joongwon Choi 2https://orcid.org/0000-0001-5978-8179Joung Eun Lim 3https://orcid.org/0000-0002-5544-9951Junnam Lee 4https://orcid.org/0000-0002-4356-9091Minyong Kang5https://orcid.org/0000-0002-6966-8813Hyun Hwan Sung 6https://orcid.org/0000-0001-9845-3742Byong Chang Jeong 7https://orcid.org/0000-0002-5399-2184Seong Il Seo 8https://orcid.org/0000-0002-9792-7798Seong Soo Jeon 9https://orcid.org/0000-0002-3265-6261Hyun Moo Lee 10https://orcid.org/0000-0003-3969-4540Hwang Gyun Jeon11https://orcid.org/0000-0002-5613-8389Department of Urology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea.Green Cross Genome, Yongin, Korea.Department of Urology, VHS Medical Center, Seoul, Korea.Samsung Biomedical Research Institute, Samsung Medical Center, Seoul, Korea.Green Cross Genome, Yongin, Korea.Department of Urology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea.Department of Urology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea.Department of Urology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea.Department of Urology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea.Department of Urology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea.Department of Urology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea.Department of Urology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea.Purpose: To investigate germline and somatic mutation profiles in Korean patients with prostate cancer using liquid biopsy and solid tissue testing and to evaluate the prognostic value of circulating tumor DNA (ctDNA) in predicting castration resistance in patients with metastatic hormone-sensitive prostate cancer (mHSPC). Materials and Methods: Plasma samples from 56 prostate cancer patients were subjected to next-generation sequencing (NGS) to identify germline mutations and ctDNA analysis using liquid biopsy to detect somatic mutations. Additionally, paired solid cancer tissues from 18 patients were subject to NGS to detect somatic mutations. The clinical parameters and ctDNA profiles of patients with mHSPC were analyzed to evaluate the prognostic value of ctDNA mutations with respect to predicting castration resistance using Cox proportional hazards regression analysis. Results: Germline mutations occurred in 3.6% of the patients in this cohort, with mutations identified in RAD50 (1.8%) and BRCA1 (1.8%). Somatic mutations detected by liquid biopsy and solid tissue testing were common in TP53 (12.5%), PIK3CA (3.6%), and TMPRSS2-ERG (3.6%). Of the 18 patients with paired tissue testing, two patients had at least one identical somatic mutation in both the liquid biopsy and solid tissue testing. In patients with mHSPC, the presence of ctDNA mutations could independently predict the castration resistance development (hazard ratio, 13.048; 95% confidential interval, 1.109–153.505; p=0.041). Conclusions: Korean patients with prostate cancer showed a relatively low germline mutation rate compared to other ethnicities. The ctDNA mutations detected by liquid biopsy can predict the development of castration resistance in patients with mHSPC.https://www.icurology.org/pdf/10.4111/icu.20200406biomarkerscirculating tumor dnaprostatic neoplasmscastration-resistant
collection DOAJ
language English
format Article
sources DOAJ
author Jiwoong Yu
Eunhae Cho
Joongwon Choi
Joung Eun Lim
Junnam Lee
Minyong Kang
Hyun Hwan Sung
Byong Chang Jeong
Seong Il Seo
Seong Soo Jeon
Hyun Moo Lee
Hwang Gyun Jeon
spellingShingle Jiwoong Yu
Eunhae Cho
Joongwon Choi
Joung Eun Lim
Junnam Lee
Minyong Kang
Hyun Hwan Sung
Byong Chang Jeong
Seong Il Seo
Seong Soo Jeon
Hyun Moo Lee
Hwang Gyun Jeon
Genomic mutation profiling using liquid biopsy in Korean patients with prostate cancer: Circulating tumor DNA mutation predicts the development of castration resistance
Investigative and Clinical Urology
biomarkers
circulating tumor dna
prostatic neoplasms
castration-resistant
author_facet Jiwoong Yu
Eunhae Cho
Joongwon Choi
Joung Eun Lim
Junnam Lee
Minyong Kang
Hyun Hwan Sung
Byong Chang Jeong
Seong Il Seo
Seong Soo Jeon
Hyun Moo Lee
Hwang Gyun Jeon
author_sort Jiwoong Yu
title Genomic mutation profiling using liquid biopsy in Korean patients with prostate cancer: Circulating tumor DNA mutation predicts the development of castration resistance
title_short Genomic mutation profiling using liquid biopsy in Korean patients with prostate cancer: Circulating tumor DNA mutation predicts the development of castration resistance
title_full Genomic mutation profiling using liquid biopsy in Korean patients with prostate cancer: Circulating tumor DNA mutation predicts the development of castration resistance
title_fullStr Genomic mutation profiling using liquid biopsy in Korean patients with prostate cancer: Circulating tumor DNA mutation predicts the development of castration resistance
title_full_unstemmed Genomic mutation profiling using liquid biopsy in Korean patients with prostate cancer: Circulating tumor DNA mutation predicts the development of castration resistance
title_sort genomic mutation profiling using liquid biopsy in korean patients with prostate cancer: circulating tumor dna mutation predicts the development of castration resistance
publisher Korean Urological Association
series Investigative and Clinical Urology
issn 2466-0493
2466-054X
publishDate 2021-03-01
description Purpose: To investigate germline and somatic mutation profiles in Korean patients with prostate cancer using liquid biopsy and solid tissue testing and to evaluate the prognostic value of circulating tumor DNA (ctDNA) in predicting castration resistance in patients with metastatic hormone-sensitive prostate cancer (mHSPC). Materials and Methods: Plasma samples from 56 prostate cancer patients were subjected to next-generation sequencing (NGS) to identify germline mutations and ctDNA analysis using liquid biopsy to detect somatic mutations. Additionally, paired solid cancer tissues from 18 patients were subject to NGS to detect somatic mutations. The clinical parameters and ctDNA profiles of patients with mHSPC were analyzed to evaluate the prognostic value of ctDNA mutations with respect to predicting castration resistance using Cox proportional hazards regression analysis. Results: Germline mutations occurred in 3.6% of the patients in this cohort, with mutations identified in RAD50 (1.8%) and BRCA1 (1.8%). Somatic mutations detected by liquid biopsy and solid tissue testing were common in TP53 (12.5%), PIK3CA (3.6%), and TMPRSS2-ERG (3.6%). Of the 18 patients with paired tissue testing, two patients had at least one identical somatic mutation in both the liquid biopsy and solid tissue testing. In patients with mHSPC, the presence of ctDNA mutations could independently predict the castration resistance development (hazard ratio, 13.048; 95% confidential interval, 1.109–153.505; p=0.041). Conclusions: Korean patients with prostate cancer showed a relatively low germline mutation rate compared to other ethnicities. The ctDNA mutations detected by liquid biopsy can predict the development of castration resistance in patients with mHSPC.
topic biomarkers
circulating tumor dna
prostatic neoplasms
castration-resistant
url https://www.icurology.org/pdf/10.4111/icu.20200406
work_keys_str_mv AT jiwoongyu genomicmutationprofilingusingliquidbiopsyinkoreanpatientswithprostatecancercirculatingtumordnamutationpredictsthedevelopmentofcastrationresistance
AT eunhaecho genomicmutationprofilingusingliquidbiopsyinkoreanpatientswithprostatecancercirculatingtumordnamutationpredictsthedevelopmentofcastrationresistance
AT joongwonchoi genomicmutationprofilingusingliquidbiopsyinkoreanpatientswithprostatecancercirculatingtumordnamutationpredictsthedevelopmentofcastrationresistance
AT joungeunlim genomicmutationprofilingusingliquidbiopsyinkoreanpatientswithprostatecancercirculatingtumordnamutationpredictsthedevelopmentofcastrationresistance
AT junnamlee genomicmutationprofilingusingliquidbiopsyinkoreanpatientswithprostatecancercirculatingtumordnamutationpredictsthedevelopmentofcastrationresistance
AT minyongkang genomicmutationprofilingusingliquidbiopsyinkoreanpatientswithprostatecancercirculatingtumordnamutationpredictsthedevelopmentofcastrationresistance
AT hyunhwansung genomicmutationprofilingusingliquidbiopsyinkoreanpatientswithprostatecancercirculatingtumordnamutationpredictsthedevelopmentofcastrationresistance
AT byongchangjeong genomicmutationprofilingusingliquidbiopsyinkoreanpatientswithprostatecancercirculatingtumordnamutationpredictsthedevelopmentofcastrationresistance
AT seongilseo genomicmutationprofilingusingliquidbiopsyinkoreanpatientswithprostatecancercirculatingtumordnamutationpredictsthedevelopmentofcastrationresistance
AT seongsoojeon genomicmutationprofilingusingliquidbiopsyinkoreanpatientswithprostatecancercirculatingtumordnamutationpredictsthedevelopmentofcastrationresistance
AT hyunmoolee genomicmutationprofilingusingliquidbiopsyinkoreanpatientswithprostatecancercirculatingtumordnamutationpredictsthedevelopmentofcastrationresistance
AT hwanggyunjeon genomicmutationprofilingusingliquidbiopsyinkoreanpatientswithprostatecancercirculatingtumordnamutationpredictsthedevelopmentofcastrationresistance
_version_ 1724225809288265728