Genome-Wide Identification and Transcriptional Expression of the <i>METTL21C</i> Gene Family in Chicken

The chicken is a common type of poultry that is economically important both for its medicinal and nutritional values. Previous studies have found that free-range chickens have more skeletal muscle mass. The methyltransferase-like 21C gene (<i>METTL21C)</i> plays an important role in musc...

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Main Authors: Ge Yang, Hongzhao Lu, Ling Wang, Jiarong Zhao, Wenxian Zeng, Tao Zhang
Format: Article
Language:English
Published: MDPI AG 2019-08-01
Series:Genes
Subjects:
Online Access:https://www.mdpi.com/2073-4425/10/8/628
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spelling doaj-61b7c99ed4ac4685a855573289ba8a932020-11-25T00:58:54ZengMDPI AGGenes2073-44252019-08-0110862810.3390/genes10080628genes10080628Genome-Wide Identification and Transcriptional Expression of the <i>METTL21C</i> Gene Family in ChickenGe Yang0Hongzhao Lu1Ling Wang2Jiarong Zhao3Wenxian Zeng4Tao Zhang5School of Biological Science and Engineering, Shaanxi University of Technology, Hanzhong, Shaanxi 723001, ChinaSchool of Biological Science and Engineering, Shaanxi University of Technology, Hanzhong, Shaanxi 723001, ChinaSchool of Biological Science and Engineering, Shaanxi University of Technology, Hanzhong, Shaanxi 723001, ChinaSchool of Biological Science and Engineering, Shaanxi University of Technology, Hanzhong, Shaanxi 723001, ChinaSchool of Biological Science and Engineering, Shaanxi University of Technology, Hanzhong, Shaanxi 723001, ChinaSchool of Biological Science and Engineering, Shaanxi University of Technology, Hanzhong, Shaanxi 723001, ChinaThe chicken is a common type of poultry that is economically important both for its medicinal and nutritional values. Previous studies have found that free-range chickens have more skeletal muscle mass. The methyltransferase-like 21C gene (<i>METTL21C)</i> plays an important role in muscle development; however, there have been few reports on the role of <i>METTL21C</i> in chickens. In this study, we performed a genome-wide identification of chicken <i>METTL21C</i> genes and analyzed their phylogeny, transcriptional expression profile, and real-time quantitative polymerase chain reaction (qPCR). We identified 10 <i>GgMETTL21C</i> genes from chickens, 11 from mice, and 32 from humans, and these genes were divided into six groups, which showed a large amount of variation among these three species. A total of 15 motifs were detected in <i>METTL21C</i> genes, and the intron phase of the gene structure showed that the <i>METTL21C</i> gene family was conservative in evolution. Further, both the transcript data and qPCR showed that a single gene&#8217;s (<i>GgMETTL21C3)</i> expression level increased with the muscle development of chickens, indicating that the <i>METTL21C</i> genes are involved in the development of chicken muscles. Our results provide some reference value for the subsequent study of the function of <i>METTL21C.</i>https://www.mdpi.com/2073-4425/10/8/628chicken<i>METTL21C</i>evolutionexpression profiling
collection DOAJ
language English
format Article
sources DOAJ
author Ge Yang
Hongzhao Lu
Ling Wang
Jiarong Zhao
Wenxian Zeng
Tao Zhang
spellingShingle Ge Yang
Hongzhao Lu
Ling Wang
Jiarong Zhao
Wenxian Zeng
Tao Zhang
Genome-Wide Identification and Transcriptional Expression of the <i>METTL21C</i> Gene Family in Chicken
Genes
chicken
<i>METTL21C</i>
evolution
expression profiling
author_facet Ge Yang
Hongzhao Lu
Ling Wang
Jiarong Zhao
Wenxian Zeng
Tao Zhang
author_sort Ge Yang
title Genome-Wide Identification and Transcriptional Expression of the <i>METTL21C</i> Gene Family in Chicken
title_short Genome-Wide Identification and Transcriptional Expression of the <i>METTL21C</i> Gene Family in Chicken
title_full Genome-Wide Identification and Transcriptional Expression of the <i>METTL21C</i> Gene Family in Chicken
title_fullStr Genome-Wide Identification and Transcriptional Expression of the <i>METTL21C</i> Gene Family in Chicken
title_full_unstemmed Genome-Wide Identification and Transcriptional Expression of the <i>METTL21C</i> Gene Family in Chicken
title_sort genome-wide identification and transcriptional expression of the <i>mettl21c</i> gene family in chicken
publisher MDPI AG
series Genes
issn 2073-4425
publishDate 2019-08-01
description The chicken is a common type of poultry that is economically important both for its medicinal and nutritional values. Previous studies have found that free-range chickens have more skeletal muscle mass. The methyltransferase-like 21C gene (<i>METTL21C)</i> plays an important role in muscle development; however, there have been few reports on the role of <i>METTL21C</i> in chickens. In this study, we performed a genome-wide identification of chicken <i>METTL21C</i> genes and analyzed their phylogeny, transcriptional expression profile, and real-time quantitative polymerase chain reaction (qPCR). We identified 10 <i>GgMETTL21C</i> genes from chickens, 11 from mice, and 32 from humans, and these genes were divided into six groups, which showed a large amount of variation among these three species. A total of 15 motifs were detected in <i>METTL21C</i> genes, and the intron phase of the gene structure showed that the <i>METTL21C</i> gene family was conservative in evolution. Further, both the transcript data and qPCR showed that a single gene&#8217;s (<i>GgMETTL21C3)</i> expression level increased with the muscle development of chickens, indicating that the <i>METTL21C</i> genes are involved in the development of chicken muscles. Our results provide some reference value for the subsequent study of the function of <i>METTL21C.</i>
topic chicken
<i>METTL21C</i>
evolution
expression profiling
url https://www.mdpi.com/2073-4425/10/8/628
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