Towards open sharing of task-based fMRI data: The OpenfMRI project

The large-scale sharing of task-based functional neuroimaging data has the potential to allow novel insights into the organization of mental function in the brain, but the field of neuroimaging has lagged behind other areas of bioscience in the development of data sharing resources. This paper descr...

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Main Authors: Russell A Poldrack, Deanna M Barch, Jason eMitchell, Tor eWager, Anthony D Wagner, Joseph T Devlin, Chad eCumba, Oluwasanmi eKoyejo, Michael eMilham
Format: Article
Language:English
Published: Frontiers Media S.A. 2013-07-01
Series:Frontiers in Neuroinformatics
Subjects:
Online Access:http://journal.frontiersin.org/Journal/10.3389/fninf.2013.00012/full
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spelling doaj-633cd4da0c8a45acb2d7400c1eadd7de2020-11-24T23:21:59ZengFrontiers Media S.A.Frontiers in Neuroinformatics1662-51962013-07-01710.3389/fninf.2013.0001244498Towards open sharing of task-based fMRI data: The OpenfMRI projectRussell A Poldrack0Deanna M Barch1Jason eMitchell2Tor eWager3Anthony D Wagner4Joseph T Devlin5Chad eCumba6Oluwasanmi eKoyejo7Michael eMilham8University of TexasWashington UniversityHarvard UniversityUniversity of ColoradoStanford UniversityUniversity College LondonUniversity of TexasUniversity of TexasChild Mind InstituteThe large-scale sharing of task-based functional neuroimaging data has the potential to allow novel insights into the organization of mental function in the brain, but the field of neuroimaging has lagged behind other areas of bioscience in the development of data sharing resources. This paper describes the OpenFMRI project (accessible online at http://www.openfmri.org), which aims to provide the neuroimaging community with a resource to support open sharing of task-based fMRI studies. We describe the motivation behind the project, focusing particularly on how this project addresses some of the well-known challenges to sharing of task-based fMRI data. Results from a preliminary analysis of the current database are presented, which demonstrate the ability to classify between task contrasts with high generalization accuracy across subjects, and the ability to identify individual subjects from their activation maps with moderately high accuracy. Clustering analyses show that the similarity relations between statistical maps have a somewhat orderly relation to the mental functions engaged by the relevant tasks. These results highlight the potential of the project to support large-scale multivariate analyses of the relation between mental processes and brain function.http://journal.frontiersin.org/Journal/10.3389/fninf.2013.00012/fullClassificationInformaticsdata sharingmetadatamultivariate
collection DOAJ
language English
format Article
sources DOAJ
author Russell A Poldrack
Deanna M Barch
Jason eMitchell
Tor eWager
Anthony D Wagner
Joseph T Devlin
Chad eCumba
Oluwasanmi eKoyejo
Michael eMilham
spellingShingle Russell A Poldrack
Deanna M Barch
Jason eMitchell
Tor eWager
Anthony D Wagner
Joseph T Devlin
Chad eCumba
Oluwasanmi eKoyejo
Michael eMilham
Towards open sharing of task-based fMRI data: The OpenfMRI project
Frontiers in Neuroinformatics
Classification
Informatics
data sharing
metadata
multivariate
author_facet Russell A Poldrack
Deanna M Barch
Jason eMitchell
Tor eWager
Anthony D Wagner
Joseph T Devlin
Chad eCumba
Oluwasanmi eKoyejo
Michael eMilham
author_sort Russell A Poldrack
title Towards open sharing of task-based fMRI data: The OpenfMRI project
title_short Towards open sharing of task-based fMRI data: The OpenfMRI project
title_full Towards open sharing of task-based fMRI data: The OpenfMRI project
title_fullStr Towards open sharing of task-based fMRI data: The OpenfMRI project
title_full_unstemmed Towards open sharing of task-based fMRI data: The OpenfMRI project
title_sort towards open sharing of task-based fmri data: the openfmri project
publisher Frontiers Media S.A.
series Frontiers in Neuroinformatics
issn 1662-5196
publishDate 2013-07-01
description The large-scale sharing of task-based functional neuroimaging data has the potential to allow novel insights into the organization of mental function in the brain, but the field of neuroimaging has lagged behind other areas of bioscience in the development of data sharing resources. This paper describes the OpenFMRI project (accessible online at http://www.openfmri.org), which aims to provide the neuroimaging community with a resource to support open sharing of task-based fMRI studies. We describe the motivation behind the project, focusing particularly on how this project addresses some of the well-known challenges to sharing of task-based fMRI data. Results from a preliminary analysis of the current database are presented, which demonstrate the ability to classify between task contrasts with high generalization accuracy across subjects, and the ability to identify individual subjects from their activation maps with moderately high accuracy. Clustering analyses show that the similarity relations between statistical maps have a somewhat orderly relation to the mental functions engaged by the relevant tasks. These results highlight the potential of the project to support large-scale multivariate analyses of the relation between mental processes and brain function.
topic Classification
Informatics
data sharing
metadata
multivariate
url http://journal.frontiersin.org/Journal/10.3389/fninf.2013.00012/full
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