MitoSuite: a graphical tool for human mitochondrial genome profiling in massive parallel sequencing

Recent rapid advances in high-throughput, next-generation sequencing (NGS) technologies have promoted mitochondrial genome studies in the fields of human evolution, medical genetics, and forensic casework. However, scientists unfamiliar with computer programming often find it difficult to handle the...

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Main Authors: Koji Ishiya, Shintaroh Ueda
Format: Article
Language:English
Published: PeerJ Inc. 2017-05-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/3406.pdf
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spelling doaj-666afe577ae34e489865c7da935203222020-11-25T00:29:16ZengPeerJ Inc.PeerJ2167-83592017-05-015e340610.7717/peerj.3406MitoSuite: a graphical tool for human mitochondrial genome profiling in massive parallel sequencingKoji Ishiya0Shintaroh Ueda1Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, JapanDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, JapanRecent rapid advances in high-throughput, next-generation sequencing (NGS) technologies have promoted mitochondrial genome studies in the fields of human evolution, medical genetics, and forensic casework. However, scientists unfamiliar with computer programming often find it difficult to handle the massive volumes of data that are generated by NGS. To address this limitation, we developed MitoSuite, a user-friendly graphical tool for analysis of data from high-throughput sequencing of the human mitochondrial genome. MitoSuite generates a visual report on NGS data with simple mouse operations. Moreover, it analyzes high-coverage sequencing data but runs on a stand-alone computer, without the need for file upload. Therefore, MitoSuite offers outstanding usability for handling massive NGS data, and is ideal for evolutionary, clinical, and forensic studies on the human mitochondrial genome variations. It is freely available for download from the website https://mitosuite.com.https://peerj.com/articles/3406.pdfMitoSuiteMitochondrial genomeNext-generation sequencingGraphical toolMassively parallel sequencing
collection DOAJ
language English
format Article
sources DOAJ
author Koji Ishiya
Shintaroh Ueda
spellingShingle Koji Ishiya
Shintaroh Ueda
MitoSuite: a graphical tool for human mitochondrial genome profiling in massive parallel sequencing
PeerJ
MitoSuite
Mitochondrial genome
Next-generation sequencing
Graphical tool
Massively parallel sequencing
author_facet Koji Ishiya
Shintaroh Ueda
author_sort Koji Ishiya
title MitoSuite: a graphical tool for human mitochondrial genome profiling in massive parallel sequencing
title_short MitoSuite: a graphical tool for human mitochondrial genome profiling in massive parallel sequencing
title_full MitoSuite: a graphical tool for human mitochondrial genome profiling in massive parallel sequencing
title_fullStr MitoSuite: a graphical tool for human mitochondrial genome profiling in massive parallel sequencing
title_full_unstemmed MitoSuite: a graphical tool for human mitochondrial genome profiling in massive parallel sequencing
title_sort mitosuite: a graphical tool for human mitochondrial genome profiling in massive parallel sequencing
publisher PeerJ Inc.
series PeerJ
issn 2167-8359
publishDate 2017-05-01
description Recent rapid advances in high-throughput, next-generation sequencing (NGS) technologies have promoted mitochondrial genome studies in the fields of human evolution, medical genetics, and forensic casework. However, scientists unfamiliar with computer programming often find it difficult to handle the massive volumes of data that are generated by NGS. To address this limitation, we developed MitoSuite, a user-friendly graphical tool for analysis of data from high-throughput sequencing of the human mitochondrial genome. MitoSuite generates a visual report on NGS data with simple mouse operations. Moreover, it analyzes high-coverage sequencing data but runs on a stand-alone computer, without the need for file upload. Therefore, MitoSuite offers outstanding usability for handling massive NGS data, and is ideal for evolutionary, clinical, and forensic studies on the human mitochondrial genome variations. It is freely available for download from the website https://mitosuite.com.
topic MitoSuite
Mitochondrial genome
Next-generation sequencing
Graphical tool
Massively parallel sequencing
url https://peerj.com/articles/3406.pdf
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