Structural and Functional Sensing of Bio-Tissues Based on Compressive Sensing Spectral Domain Optical Coherence Tomography

In this paper, a full depth 2D CS-SDOCT approach is proposed, which combines two-dimensional (2D) compressive sensing spectral-domain optical coherence tomography (CS-SDOCT) and dispersion encoding (ED) technologies, and its applications in structural imaging and functional sensing of bio-tissues ar...

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Main Authors: Luying Yi, Xiangyu Guo, Liqun Sun, Bo Hou
Format: Article
Language:English
Published: MDPI AG 2019-09-01
Series:Sensors
Subjects:
Online Access:https://www.mdpi.com/1424-8220/19/19/4208
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spelling doaj-6684fb7b5c1c49239a8d098c69c266af2020-11-25T02:36:19ZengMDPI AGSensors1424-82202019-09-011919420810.3390/s19194208s19194208Structural and Functional Sensing of Bio-Tissues Based on Compressive Sensing Spectral Domain Optical Coherence TomographyLuying Yi0Xiangyu Guo1Liqun Sun2Bo Hou3State Key Laboratory of Precision Measurement Technology & Instruments, Department of Precision Instrument, Tsinghua University, Beijing 100084, ChinaState Key Laboratory of Precision Measurement Technology & Instruments, Department of Precision Instrument, Tsinghua University, Beijing 100084, ChinaState Key Laboratory of Precision Measurement Technology & Instruments, Department of Precision Instrument, Tsinghua University, Beijing 100084, ChinaState Key Laboratory of Precision Measurement Technology & Instruments, Department of Precision Instrument, Tsinghua University, Beijing 100084, ChinaIn this paper, a full depth 2D CS-SDOCT approach is proposed, which combines two-dimensional (2D) compressive sensing spectral-domain optical coherence tomography (CS-SDOCT) and dispersion encoding (ED) technologies, and its applications in structural imaging and functional sensing of bio-tissues are studied. Specifically, by introducing a large dispersion mismatch between the reference arm and sample arm in SD-OCT system, the reconstruction of the under-sampled A-scan data and the removal of the conjugated images can be achieved simultaneously by only two iterations. The under-sampled B-scan data is then reconstructed using the classic CS reconstruction algorithm. For a 5 mm × 3.2 mm fish-eye image, the conjugated image was reduced by 31.4 dB using 50% × 50% sampled data (250 depth scans and 480 spectral sampling points per depth scan), and all A-scan data was reconstructed in only 1.2 s. In addition, we analyze the application performance of the CS-SDOCT in functional sensing of locally homogeneous tissue. Simulation and experimental results show that this method can correctly reconstruct the extinction coefficient spectrum under reasonable iteration times. When 8 iterations were used to reconstruct the A-scan data in the imaging experiment of fisheye, the extinction coefficient spectrum calculated using 50% × 50% data was approximately consistent with that obtained with 100% data.https://www.mdpi.com/1424-8220/19/19/4208optical coherence tomographycompressive sensingstructural imagingfunctional sensing
collection DOAJ
language English
format Article
sources DOAJ
author Luying Yi
Xiangyu Guo
Liqun Sun
Bo Hou
spellingShingle Luying Yi
Xiangyu Guo
Liqun Sun
Bo Hou
Structural and Functional Sensing of Bio-Tissues Based on Compressive Sensing Spectral Domain Optical Coherence Tomography
Sensors
optical coherence tomography
compressive sensing
structural imaging
functional sensing
author_facet Luying Yi
Xiangyu Guo
Liqun Sun
Bo Hou
author_sort Luying Yi
title Structural and Functional Sensing of Bio-Tissues Based on Compressive Sensing Spectral Domain Optical Coherence Tomography
title_short Structural and Functional Sensing of Bio-Tissues Based on Compressive Sensing Spectral Domain Optical Coherence Tomography
title_full Structural and Functional Sensing of Bio-Tissues Based on Compressive Sensing Spectral Domain Optical Coherence Tomography
title_fullStr Structural and Functional Sensing of Bio-Tissues Based on Compressive Sensing Spectral Domain Optical Coherence Tomography
title_full_unstemmed Structural and Functional Sensing of Bio-Tissues Based on Compressive Sensing Spectral Domain Optical Coherence Tomography
title_sort structural and functional sensing of bio-tissues based on compressive sensing spectral domain optical coherence tomography
publisher MDPI AG
series Sensors
issn 1424-8220
publishDate 2019-09-01
description In this paper, a full depth 2D CS-SDOCT approach is proposed, which combines two-dimensional (2D) compressive sensing spectral-domain optical coherence tomography (CS-SDOCT) and dispersion encoding (ED) technologies, and its applications in structural imaging and functional sensing of bio-tissues are studied. Specifically, by introducing a large dispersion mismatch between the reference arm and sample arm in SD-OCT system, the reconstruction of the under-sampled A-scan data and the removal of the conjugated images can be achieved simultaneously by only two iterations. The under-sampled B-scan data is then reconstructed using the classic CS reconstruction algorithm. For a 5 mm × 3.2 mm fish-eye image, the conjugated image was reduced by 31.4 dB using 50% × 50% sampled data (250 depth scans and 480 spectral sampling points per depth scan), and all A-scan data was reconstructed in only 1.2 s. In addition, we analyze the application performance of the CS-SDOCT in functional sensing of locally homogeneous tissue. Simulation and experimental results show that this method can correctly reconstruct the extinction coefficient spectrum under reasonable iteration times. When 8 iterations were used to reconstruct the A-scan data in the imaging experiment of fisheye, the extinction coefficient spectrum calculated using 50% × 50% data was approximately consistent with that obtained with 100% data.
topic optical coherence tomography
compressive sensing
structural imaging
functional sensing
url https://www.mdpi.com/1424-8220/19/19/4208
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AT xiangyuguo structuralandfunctionalsensingofbiotissuesbasedoncompressivesensingspectraldomainopticalcoherencetomography
AT liqunsun structuralandfunctionalsensingofbiotissuesbasedoncompressivesensingspectraldomainopticalcoherencetomography
AT bohou structuralandfunctionalsensingofbiotissuesbasedoncompressivesensingspectraldomainopticalcoherencetomography
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