Denaturing high performance liquid chromatography (DHPLC) in detection of microsatellite instability
<p><strong>Background:</strong> Microsatellite instability (MSI) is a phenomenon characterized by small deletions or insertions within short tandem repeats in tumour DNA compared to matching normal DNA. MSI analysis is becoming more and more important for detection of hereditary no...
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Slovenian Medical Association
2007-12-01
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doaj-6b52e83400a44bc9bb90e5f0a961398f2020-11-24T23:12:04ZengSlovenian Medical AssociationZdravniški Vestnik1318-03471581-02242007-12-017601931Denaturing high performance liquid chromatography (DHPLC) in detection of microsatellite instabilityMetka Ravnik-GlavačGašper BergincDamjan Glavač<p><strong>Background:</strong> Microsatellite instability (MSI) is a phenomenon characterized by small deletions or insertions within short tandem repeats in tumour DNA compared to matching normal DNA. MSI analysis is becoming more and more important for detection of hereditary non-polyposis colorectal cancer as well as for sporadic primary colorectal tumours with MSI high phenotype. Use of five quasimonomorphic mononucleotide markers eliminates ultimate need for analysis of germline DNA corresponding to tumour DNA. Here we discuss our method for MSI analysis using denaturating high performance liquid chromatography (DHPLC) in combination with quasimonomorphic mononucleotide microsatellite markers in comparison with previously used methods. The method is high-throughput, accurate, quick and cost-effective and suitable for large-scale studies as well as for daily use with smaller numbers of samples.</p>http://vestnik.szd.si/index.php/ZdravVest/article/view/1984microsatellite instabilitymononucleotide microsatellite markersmultiplex PCRDHPLC |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Metka Ravnik-Glavač Gašper Berginc Damjan Glavač |
spellingShingle |
Metka Ravnik-Glavač Gašper Berginc Damjan Glavač Denaturing high performance liquid chromatography (DHPLC) in detection of microsatellite instability Zdravniški Vestnik microsatellite instability mononucleotide microsatellite markers multiplex PCR DHPLC |
author_facet |
Metka Ravnik-Glavač Gašper Berginc Damjan Glavač |
author_sort |
Metka Ravnik-Glavač |
title |
Denaturing high performance liquid chromatography (DHPLC) in detection of microsatellite instability |
title_short |
Denaturing high performance liquid chromatography (DHPLC) in detection of microsatellite instability |
title_full |
Denaturing high performance liquid chromatography (DHPLC) in detection of microsatellite instability |
title_fullStr |
Denaturing high performance liquid chromatography (DHPLC) in detection of microsatellite instability |
title_full_unstemmed |
Denaturing high performance liquid chromatography (DHPLC) in detection of microsatellite instability |
title_sort |
denaturing high performance liquid chromatography (dhplc) in detection of microsatellite instability |
publisher |
Slovenian Medical Association |
series |
Zdravniški Vestnik |
issn |
1318-0347 1581-0224 |
publishDate |
2007-12-01 |
description |
<p><strong>Background:</strong> Microsatellite instability (MSI) is a phenomenon characterized by small deletions or insertions within short tandem repeats in tumour DNA compared to matching normal DNA. MSI analysis is becoming more and more important for detection of hereditary non-polyposis colorectal cancer as well as for sporadic primary colorectal tumours with MSI high phenotype. Use of five quasimonomorphic mononucleotide markers eliminates ultimate need for analysis of germline DNA corresponding to tumour DNA. Here we discuss our method for MSI analysis using denaturating high performance liquid chromatography (DHPLC) in combination with quasimonomorphic mononucleotide microsatellite markers in comparison with previously used methods. The method is high-throughput, accurate, quick and cost-effective and suitable for large-scale studies as well as for daily use with smaller numbers of samples.</p> |
topic |
microsatellite instability mononucleotide microsatellite markers multiplex PCR DHPLC |
url |
http://vestnik.szd.si/index.php/ZdravVest/article/view/1984 |
work_keys_str_mv |
AT metkaravnikglavac denaturinghighperformanceliquidchromatographydhplcindetectionofmicrosatelliteinstability AT gasperberginc denaturinghighperformanceliquidchromatographydhplcindetectionofmicrosatelliteinstability AT damjanglavac denaturinghighperformanceliquidchromatographydhplcindetectionofmicrosatelliteinstability |
_version_ |
1725602582147104768 |