Computer-aided identification of prostatic adenocarcinoma: Segmentation of glandular structures

Background: Identification of individual prostatic glandular structures is an important prerequisite to quantitative histological analysis of prostate cancer with the aid of a computer. We have developed a computer method to segment individual glandular units and to extract quantitative image featur...

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Main Authors: Yahui Peng, Yulei Jiang, Laurie Eisengart, Mark A Healy, Francis H Straus, Ximing J Yang
Format: Article
Language:English
Published: Wolters Kluwer Medknow Publications 2011-01-01
Series:Journal of Pathology Informatics
Subjects:
Online Access:http://www.jpathinformatics.org/article.asp?issn=2153-3539;year=2011;volume=2;issue=1;spage=33;epage=33;aulast=Peng
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spelling doaj-6c8fa30be49a4705b51fd917d9da52b92020-11-24T23:43:28ZengWolters Kluwer Medknow PublicationsJournal of Pathology Informatics2153-35392153-35392011-01-0121333310.4103/2153-3539.83193Computer-aided identification of prostatic adenocarcinoma: Segmentation of glandular structuresYahui PengYulei JiangLaurie EisengartMark A HealyFrancis H StrausXiming J YangBackground: Identification of individual prostatic glandular structures is an important prerequisite to quantitative histological analysis of prostate cancer with the aid of a computer. We have developed a computer method to segment individual glandular units and to extract quantitative image features, for computer identification of prostatic adenocarcinoma. Methods: Two sets of digital histology images were used: database I (n = 57) for developing and testing the computer technique, and database II (n = 116) for independent validation. The segmentation technique was based on a k-means clustering and a region-growing method. Computer segmentation results were evaluated subjectively and also compared quantitatively against manual gland outlines, using the Jaccard similarity measure. Quantitative features that were extracted from the computer segmentation results include average gland size, spatial gland density, and average gland circularity. Linear discriminant analysis (LDA) was used to combine quantitative image features. Classification performance was evaluated with receiver operating characteristic (ROC) analysis and the area under the ROC curve (AUC). Results: Jaccard similarity coefficients between computer segmentation and manual outlines of individual glands were between 0.63 and 0.72 for non-cancer and between 0.48 and 0.54 for malignant glands, respectively, similar to an interobserver agreement of 0.79 for non-cancer and 0.75 for malignant glands, respectively. The AUC value for the features of average gland size and gland density combined via LDA was 0.91 for database I and 0.96 for database II. Conclusions: Using a computer, we are able to delineate individual prostatic glands automatically and identify prostatic adenocarcinoma accurately, based on the quantitative image features extracted from computer-segmented glandular structures.http://www.jpathinformatics.org/article.asp?issn=2153-3539;year=2011;volume=2;issue=1;spage=33;epage=33;aulast=PengComputer-aided classificationdigital histology imagesfeature analysisimage segmentationprostatic adenocarcinoma
collection DOAJ
language English
format Article
sources DOAJ
author Yahui Peng
Yulei Jiang
Laurie Eisengart
Mark A Healy
Francis H Straus
Ximing J Yang
spellingShingle Yahui Peng
Yulei Jiang
Laurie Eisengart
Mark A Healy
Francis H Straus
Ximing J Yang
Computer-aided identification of prostatic adenocarcinoma: Segmentation of glandular structures
Journal of Pathology Informatics
Computer-aided classification
digital histology images
feature analysis
image segmentation
prostatic adenocarcinoma
author_facet Yahui Peng
Yulei Jiang
Laurie Eisengart
Mark A Healy
Francis H Straus
Ximing J Yang
author_sort Yahui Peng
title Computer-aided identification of prostatic adenocarcinoma: Segmentation of glandular structures
title_short Computer-aided identification of prostatic adenocarcinoma: Segmentation of glandular structures
title_full Computer-aided identification of prostatic adenocarcinoma: Segmentation of glandular structures
title_fullStr Computer-aided identification of prostatic adenocarcinoma: Segmentation of glandular structures
title_full_unstemmed Computer-aided identification of prostatic adenocarcinoma: Segmentation of glandular structures
title_sort computer-aided identification of prostatic adenocarcinoma: segmentation of glandular structures
publisher Wolters Kluwer Medknow Publications
series Journal of Pathology Informatics
issn 2153-3539
2153-3539
publishDate 2011-01-01
description Background: Identification of individual prostatic glandular structures is an important prerequisite to quantitative histological analysis of prostate cancer with the aid of a computer. We have developed a computer method to segment individual glandular units and to extract quantitative image features, for computer identification of prostatic adenocarcinoma. Methods: Two sets of digital histology images were used: database I (n = 57) for developing and testing the computer technique, and database II (n = 116) for independent validation. The segmentation technique was based on a k-means clustering and a region-growing method. Computer segmentation results were evaluated subjectively and also compared quantitatively against manual gland outlines, using the Jaccard similarity measure. Quantitative features that were extracted from the computer segmentation results include average gland size, spatial gland density, and average gland circularity. Linear discriminant analysis (LDA) was used to combine quantitative image features. Classification performance was evaluated with receiver operating characteristic (ROC) analysis and the area under the ROC curve (AUC). Results: Jaccard similarity coefficients between computer segmentation and manual outlines of individual glands were between 0.63 and 0.72 for non-cancer and between 0.48 and 0.54 for malignant glands, respectively, similar to an interobserver agreement of 0.79 for non-cancer and 0.75 for malignant glands, respectively. The AUC value for the features of average gland size and gland density combined via LDA was 0.91 for database I and 0.96 for database II. Conclusions: Using a computer, we are able to delineate individual prostatic glands automatically and identify prostatic adenocarcinoma accurately, based on the quantitative image features extracted from computer-segmented glandular structures.
topic Computer-aided classification
digital histology images
feature analysis
image segmentation
prostatic adenocarcinoma
url http://www.jpathinformatics.org/article.asp?issn=2153-3539;year=2011;volume=2;issue=1;spage=33;epage=33;aulast=Peng
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AT laurieeisengart computeraidedidentificationofprostaticadenocarcinomasegmentationofglandularstructures
AT markahealy computeraidedidentificationofprostaticadenocarcinomasegmentationofglandularstructures
AT francishstraus computeraidedidentificationofprostaticadenocarcinomasegmentationofglandularstructures
AT ximingjyang computeraidedidentificationofprostaticadenocarcinomasegmentationofglandularstructures
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