Structural Basis for Plant MADS Transcription Factor Oligomerization

MADS transcription factors (TFs) are DNA binding proteins found in almost all eukaryotes that play essential roles in diverse biological processes. While present in animals and fungi as a small TF family, the family has dramatically expanded in plants over the course of evolution, with the model flo...

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Main Authors: Xuelei Lai, Hussein Daher, Antonin Galien, Veronique Hugouvieux, Chloe Zubieta
Format: Article
Language:English
Published: Elsevier 2019-01-01
Series:Computational and Structural Biotechnology Journal
Online Access:http://www.sciencedirect.com/science/article/pii/S2001037019300753
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spelling doaj-6fca5e9f35ab45de96544fdb3ba12c982020-11-25T02:45:08ZengElsevierComputational and Structural Biotechnology Journal2001-03702019-01-0117946953Structural Basis for Plant MADS Transcription Factor OligomerizationXuelei Lai0Hussein Daher1Antonin Galien2Veronique Hugouvieux3Chloe Zubieta4Corresponding authors.; Laboratoire de Physiologie Cellulaire et Végétale, CNRS, Univ. Grenoble Alpes, CEA, INRA, IRIG, Grenoble, FranceLaboratoire de Physiologie Cellulaire et Végétale, CNRS, Univ. Grenoble Alpes, CEA, INRA, IRIG, Grenoble, FranceLaboratoire de Physiologie Cellulaire et Végétale, CNRS, Univ. Grenoble Alpes, CEA, INRA, IRIG, Grenoble, FranceLaboratoire de Physiologie Cellulaire et Végétale, CNRS, Univ. Grenoble Alpes, CEA, INRA, IRIG, Grenoble, FranceCorresponding authors.; Laboratoire de Physiologie Cellulaire et Végétale, CNRS, Univ. Grenoble Alpes, CEA, INRA, IRIG, Grenoble, FranceMADS transcription factors (TFs) are DNA binding proteins found in almost all eukaryotes that play essential roles in diverse biological processes. While present in animals and fungi as a small TF family, the family has dramatically expanded in plants over the course of evolution, with the model flowering plant, Arabidopsis thaliana, possessing over 100 type I and type II MADS TFs. All MADS TFs contain a core and highly conserved DNA binding domain called the MADS or M domain. Plant MADS TFs have diversified this domain with plant-specific auxiliary domains. Plant type I MADS TFs have a highly diverse and largely unstructured Carboxy-terminal (C domain), whereas type II MADS have added oligomerization domains, called Intervening (I domain) and Keratin-like (K domain), in addition to the C domain. In this mini review, we describe the overall structure of the type II “MIKC” type MADS TFs in plants, with a focus on the K domain, a critical oligomerization module. We summarize the determining factors for oligomerization and provide mechanistic insights on how secondary structural elements are required for oligomerization capability and specificity. Using MADS TFs that are involved in flower organ specification as an example, we provide case studies and homology modeling of MADS TFs complex formation. Finally, we highlight outstanding questions in the field. Keywords: MADS transcription factors, Oligomerization, Floral development, Arabidopsishttp://www.sciencedirect.com/science/article/pii/S2001037019300753
collection DOAJ
language English
format Article
sources DOAJ
author Xuelei Lai
Hussein Daher
Antonin Galien
Veronique Hugouvieux
Chloe Zubieta
spellingShingle Xuelei Lai
Hussein Daher
Antonin Galien
Veronique Hugouvieux
Chloe Zubieta
Structural Basis for Plant MADS Transcription Factor Oligomerization
Computational and Structural Biotechnology Journal
author_facet Xuelei Lai
Hussein Daher
Antonin Galien
Veronique Hugouvieux
Chloe Zubieta
author_sort Xuelei Lai
title Structural Basis for Plant MADS Transcription Factor Oligomerization
title_short Structural Basis for Plant MADS Transcription Factor Oligomerization
title_full Structural Basis for Plant MADS Transcription Factor Oligomerization
title_fullStr Structural Basis for Plant MADS Transcription Factor Oligomerization
title_full_unstemmed Structural Basis for Plant MADS Transcription Factor Oligomerization
title_sort structural basis for plant mads transcription factor oligomerization
publisher Elsevier
series Computational and Structural Biotechnology Journal
issn 2001-0370
publishDate 2019-01-01
description MADS transcription factors (TFs) are DNA binding proteins found in almost all eukaryotes that play essential roles in diverse biological processes. While present in animals and fungi as a small TF family, the family has dramatically expanded in plants over the course of evolution, with the model flowering plant, Arabidopsis thaliana, possessing over 100 type I and type II MADS TFs. All MADS TFs contain a core and highly conserved DNA binding domain called the MADS or M domain. Plant MADS TFs have diversified this domain with plant-specific auxiliary domains. Plant type I MADS TFs have a highly diverse and largely unstructured Carboxy-terminal (C domain), whereas type II MADS have added oligomerization domains, called Intervening (I domain) and Keratin-like (K domain), in addition to the C domain. In this mini review, we describe the overall structure of the type II “MIKC” type MADS TFs in plants, with a focus on the K domain, a critical oligomerization module. We summarize the determining factors for oligomerization and provide mechanistic insights on how secondary structural elements are required for oligomerization capability and specificity. Using MADS TFs that are involved in flower organ specification as an example, we provide case studies and homology modeling of MADS TFs complex formation. Finally, we highlight outstanding questions in the field. Keywords: MADS transcription factors, Oligomerization, Floral development, Arabidopsis
url http://www.sciencedirect.com/science/article/pii/S2001037019300753
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