The sea lamprey <it>Petromyzon marinus </it>genome reveals the early origin of several chemosensory receptor families in the vertebrate lineage

<p>Abstract</p> <p>Background</p> <p>In gnathostomes, chemosensory receptors (CR) expressed in olfactory epithelia are encoded by evolutionarily dynamic gene families encoding odorant receptors (OR), trace amine-associated receptors (TAAR), V1Rs and V2Rs. A limited numb...

Full description

Bibliographic Details
Main Authors: Zhang Ziping, Chung-Davidson Yu-Wen, Teeter John H, Wu Hong, Carr Kevin, Libants Scot, Wilkerson Curt, Li Weiming
Format: Article
Language:English
Published: BMC 2009-07-01
Series:BMC Evolutionary Biology
Online Access:http://www.biomedcentral.com/1471-2148/9/180
id doaj-717b1024f65a4fbda43231de9e5109a6
record_format Article
spelling doaj-717b1024f65a4fbda43231de9e5109a62021-09-02T10:39:20ZengBMCBMC Evolutionary Biology1471-21482009-07-019118010.1186/1471-2148-9-180The sea lamprey <it>Petromyzon marinus </it>genome reveals the early origin of several chemosensory receptor families in the vertebrate lineageZhang ZipingChung-Davidson Yu-WenTeeter John HWu HongCarr KevinLibants ScotWilkerson CurtLi Weiming<p>Abstract</p> <p>Background</p> <p>In gnathostomes, chemosensory receptors (CR) expressed in olfactory epithelia are encoded by evolutionarily dynamic gene families encoding odorant receptors (OR), trace amine-associated receptors (TAAR), V1Rs and V2Rs. A limited number of OR-like sequences have been found in invertebrate chordate genomes. Whether these gene families arose in basal or advanced vertebrates has not been resolved because these families have not been examined systematically in agnathan genomes.</p> <p>Results</p> <p><it>Petromyzon </it>is the only extant jawless vertebrate whose genome has been sequenced. Known to be exquisitely sensitive to several classes of odorants, lampreys detect fewer amino acids and steroids than teleosts. This reduced number of detectable odorants is indicative of reduced numbers of CR gene families or a reduced number of genes within CR families, or both, in the sea lamprey. In the lamprey genome we identified a repertoire of 59 intact single-exon CR genes, including 27 OR, 28 TAAR, and four V1R-like genes. These three CR families were expressed in the olfactory organ of both parasitic and adult life stages.</p> <p>Conclusion</p> <p>An extensive search in the lamprey genome failed to identify potential orthologs or pseudogenes of the multi-exon V2R family that is greatly expanded in teleost genomes, but did find intact calcium-sensing receptors (CASR) and intact metabotropic glutamate receptors (MGR). We conclude that OR and V1R arose in chordates after the cephalochordate-urochordate split, but before the diversification of jawed and jawless vertebrates. The advent and diversification of V2R genes from glutamate receptor-family G protein-coupled receptors, most likely the CASR, occurred after the agnathan-gnathostome divergence.</p> http://www.biomedcentral.com/1471-2148/9/180
collection DOAJ
language English
format Article
sources DOAJ
author Zhang Ziping
Chung-Davidson Yu-Wen
Teeter John H
Wu Hong
Carr Kevin
Libants Scot
Wilkerson Curt
Li Weiming
spellingShingle Zhang Ziping
Chung-Davidson Yu-Wen
Teeter John H
Wu Hong
Carr Kevin
Libants Scot
Wilkerson Curt
Li Weiming
The sea lamprey <it>Petromyzon marinus </it>genome reveals the early origin of several chemosensory receptor families in the vertebrate lineage
BMC Evolutionary Biology
author_facet Zhang Ziping
Chung-Davidson Yu-Wen
Teeter John H
Wu Hong
Carr Kevin
Libants Scot
Wilkerson Curt
Li Weiming
author_sort Zhang Ziping
title The sea lamprey <it>Petromyzon marinus </it>genome reveals the early origin of several chemosensory receptor families in the vertebrate lineage
title_short The sea lamprey <it>Petromyzon marinus </it>genome reveals the early origin of several chemosensory receptor families in the vertebrate lineage
title_full The sea lamprey <it>Petromyzon marinus </it>genome reveals the early origin of several chemosensory receptor families in the vertebrate lineage
title_fullStr The sea lamprey <it>Petromyzon marinus </it>genome reveals the early origin of several chemosensory receptor families in the vertebrate lineage
title_full_unstemmed The sea lamprey <it>Petromyzon marinus </it>genome reveals the early origin of several chemosensory receptor families in the vertebrate lineage
title_sort sea lamprey <it>petromyzon marinus </it>genome reveals the early origin of several chemosensory receptor families in the vertebrate lineage
publisher BMC
series BMC Evolutionary Biology
issn 1471-2148
publishDate 2009-07-01
description <p>Abstract</p> <p>Background</p> <p>In gnathostomes, chemosensory receptors (CR) expressed in olfactory epithelia are encoded by evolutionarily dynamic gene families encoding odorant receptors (OR), trace amine-associated receptors (TAAR), V1Rs and V2Rs. A limited number of OR-like sequences have been found in invertebrate chordate genomes. Whether these gene families arose in basal or advanced vertebrates has not been resolved because these families have not been examined systematically in agnathan genomes.</p> <p>Results</p> <p><it>Petromyzon </it>is the only extant jawless vertebrate whose genome has been sequenced. Known to be exquisitely sensitive to several classes of odorants, lampreys detect fewer amino acids and steroids than teleosts. This reduced number of detectable odorants is indicative of reduced numbers of CR gene families or a reduced number of genes within CR families, or both, in the sea lamprey. In the lamprey genome we identified a repertoire of 59 intact single-exon CR genes, including 27 OR, 28 TAAR, and four V1R-like genes. These three CR families were expressed in the olfactory organ of both parasitic and adult life stages.</p> <p>Conclusion</p> <p>An extensive search in the lamprey genome failed to identify potential orthologs or pseudogenes of the multi-exon V2R family that is greatly expanded in teleost genomes, but did find intact calcium-sensing receptors (CASR) and intact metabotropic glutamate receptors (MGR). We conclude that OR and V1R arose in chordates after the cephalochordate-urochordate split, but before the diversification of jawed and jawless vertebrates. The advent and diversification of V2R genes from glutamate receptor-family G protein-coupled receptors, most likely the CASR, occurred after the agnathan-gnathostome divergence.</p>
url http://www.biomedcentral.com/1471-2148/9/180
work_keys_str_mv AT zhangziping thesealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT chungdavidsonyuwen thesealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT teeterjohnh thesealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT wuhong thesealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT carrkevin thesealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT libantsscot thesealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT wilkersoncurt thesealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT liweiming thesealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT zhangziping sealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT chungdavidsonyuwen sealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT teeterjohnh sealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT wuhong sealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT carrkevin sealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT libantsscot sealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT wilkersoncurt sealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
AT liweiming sealampreyitpetromyzonmarinusitgenomerevealstheearlyoriginofseveralchemosensoryreceptorfamiliesinthevertebratelineage
_version_ 1721176341850619904