Affinity Selection in Germinal Centers: Cautionary Tales and New Opportunities

Our current quantitative knowledge of the kinetics of antibody-mediated immunity is partly based on idealized experiments throughout the last decades. However, new experimental techniques often render contradictory quantitative outcomes that shake previously uncontroversial assumptions. This has bee...

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Main Authors: Jose Faro, Mario Castro
Format: Article
Language:English
Published: MDPI AG 2021-04-01
Series:Cells
Subjects:
Online Access:https://www.mdpi.com/2073-4409/10/5/1040
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spelling doaj-722680f5f77c4c8f83e830dc575229ba2021-04-28T23:03:08ZengMDPI AGCells2073-44092021-04-01101040104010.3390/cells10051040Affinity Selection in Germinal Centers: Cautionary Tales and New OpportunitiesJose Faro0Mario Castro1Area of Immunology, Faculty of Biology, Biomedical Research Center (CINBIO), Universidade de Vigo, 36310 Vigo, SpainInstituto de Investigación Tecnológica (IIT), Grupo Interdisciplinar de Sistemas Complejos (GISC), Universidad Pontificia Comillas, 28015 Madrid, SpainOur current quantitative knowledge of the kinetics of antibody-mediated immunity is partly based on idealized experiments throughout the last decades. However, new experimental techniques often render contradictory quantitative outcomes that shake previously uncontroversial assumptions. This has been the case in the field of T-cell receptors, where recent techniques for measuring the 2-dimensional rate constants of T-cell receptor–ligand interactions exposed results contradictory to those obtained with techniques measuring 3-dimensional interactions. Recently, we have developed a mathematical framework to rationalize those discrepancies, focusing on the proper fine-grained description of the underlying kinetic steps involved in the immune synapse. In this perspective article, we apply this approach to unveil potential blind spots in the case of B-cell receptors (BCR) and to rethink the interactions between B cells and follicular dendritic cells (FDC) during the germinal center (GC) reaction. Also, we elaborate on the concept of “catch bonds” and on the recent observations that B-cell synapses retract and pull antigen generating a “retracting force”, and propose some testable predictions that can lead to future research.https://www.mdpi.com/2073-4409/10/5/1040antibody-antigen bindingkineticsmathematical modelingcatch-bondallostery
collection DOAJ
language English
format Article
sources DOAJ
author Jose Faro
Mario Castro
spellingShingle Jose Faro
Mario Castro
Affinity Selection in Germinal Centers: Cautionary Tales and New Opportunities
Cells
antibody-antigen binding
kinetics
mathematical modeling
catch-bond
allostery
author_facet Jose Faro
Mario Castro
author_sort Jose Faro
title Affinity Selection in Germinal Centers: Cautionary Tales and New Opportunities
title_short Affinity Selection in Germinal Centers: Cautionary Tales and New Opportunities
title_full Affinity Selection in Germinal Centers: Cautionary Tales and New Opportunities
title_fullStr Affinity Selection in Germinal Centers: Cautionary Tales and New Opportunities
title_full_unstemmed Affinity Selection in Germinal Centers: Cautionary Tales and New Opportunities
title_sort affinity selection in germinal centers: cautionary tales and new opportunities
publisher MDPI AG
series Cells
issn 2073-4409
publishDate 2021-04-01
description Our current quantitative knowledge of the kinetics of antibody-mediated immunity is partly based on idealized experiments throughout the last decades. However, new experimental techniques often render contradictory quantitative outcomes that shake previously uncontroversial assumptions. This has been the case in the field of T-cell receptors, where recent techniques for measuring the 2-dimensional rate constants of T-cell receptor–ligand interactions exposed results contradictory to those obtained with techniques measuring 3-dimensional interactions. Recently, we have developed a mathematical framework to rationalize those discrepancies, focusing on the proper fine-grained description of the underlying kinetic steps involved in the immune synapse. In this perspective article, we apply this approach to unveil potential blind spots in the case of B-cell receptors (BCR) and to rethink the interactions between B cells and follicular dendritic cells (FDC) during the germinal center (GC) reaction. Also, we elaborate on the concept of “catch bonds” and on the recent observations that B-cell synapses retract and pull antigen generating a “retracting force”, and propose some testable predictions that can lead to future research.
topic antibody-antigen binding
kinetics
mathematical modeling
catch-bond
allostery
url https://www.mdpi.com/2073-4409/10/5/1040
work_keys_str_mv AT josefaro affinityselectioningerminalcenterscautionarytalesandnewopportunities
AT mariocastro affinityselectioningerminalcenterscautionarytalesandnewopportunities
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