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spelling doaj-722776cd07cd4898b11d91fbcc3ffabd2021-03-15T06:10:59ZengFrontiers Media S.A.Frontiers in Immunology1664-32242021-03-011210.3389/fimmu.2021.626793626793The Future of Blood Testing Is the ImmunomeRamy A. Arnaout0Ramy A. Arnaout1Eline T. Luning Prak2Nicholas Schwab3Florian Rubelt4the Adaptive Immune Receptor Repertoire CommunityRamy A. ArnaoutRohit AroraRachael Bashford-RogersFelix BredenSyed Ahmad Chan BukhariBrian CorrieLindsay G. CowellSol EfroniChristopher GooleyVictor GreiffJason Vander HeidenYoshinobu KoguchiTon LangerakTheam Soon LimEline Luning PrakEncarnita Mariotti-FerrandizSusanna MarquezPieter MeysmanEnkelejda MihoKeshav MotwaniNima NouriMilena PavlovićFlorian RubeltGeir Kjetil SandveNicholas SchwabIgor SnapkovCinque SotoUlrik StervboJohannes TrückHenk-Jan van den HamCorey WatsonCédric R. WeberDepartment of Pathology and Division of Clinical Informatics, Department of Medicine, Beth Israel Deaconess Medical Center, Boston, MA, United StatesDepartment of Pathology, Harvard Medical School, Boston, MA, United StatesDepartment of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United StatesDepartment of Neurology and Institute of Translational Neurology, University of Muenster, Muenster, GermanyRoche Sequencing Solutions, Pleasanton, CA, United StatesIt is increasingly clear that an extraordinarily diverse range of clinically important conditions—including infections, vaccinations, autoimmune diseases, transplants, transfusion reactions, aging, and cancers—leave telltale signatures in the millions of V(D)J-rearranged antibody and T cell receptor [TR per the Human Genome Organization (HUGO) nomenclature but more commonly known as TCR] genes collectively expressed by a person’s B cells (antibodies) and T cells. We refer to these as the immunome. Because of its diversity and complexity, the immunome provides singular opportunities for advancing personalized medicine by serving as the substrate for a highly multiplexed, near-universal blood test. Here we discuss some of these opportunities, the current state of immunome-based diagnostics, and highlight some of the challenges involved. We conclude with a call to clinicians, researchers, and others to join efforts with the Adaptive Immune Receptor Repertoire Community (AIRR-C) to realize the diagnostic potential of the immunome.https://www.frontiersin.org/articles/10.3389/fimmu.2021.626793/fulladaptive immune receptor repertoire (AIRR)diagnostic testT-cell receptor repertoireantibody repertoireanalysesimmunome
collection DOAJ
language English
format Article
sources DOAJ
author Ramy A. Arnaout
Ramy A. Arnaout
Eline T. Luning Prak
Nicholas Schwab
Florian Rubelt
the Adaptive Immune Receptor Repertoire Community
Ramy A. Arnaout
Rohit Arora
Rachael Bashford-Rogers
Felix Breden
Syed Ahmad Chan Bukhari
Brian Corrie
Lindsay G. Cowell
Sol Efroni
Christopher Gooley
Victor Greiff
Jason Vander Heiden
Yoshinobu Koguchi
Ton Langerak
Theam Soon Lim
Eline Luning Prak
Encarnita Mariotti-Ferrandiz
Susanna Marquez
Pieter Meysman
Enkelejda Miho
Keshav Motwani
Nima Nouri
Milena Pavlović
Florian Rubelt
Geir Kjetil Sandve
Nicholas Schwab
Igor Snapkov
Cinque Soto
Ulrik Stervbo
Johannes Trück
Henk-Jan van den Ham
Corey Watson
Cédric R. Weber
spellingShingle Ramy A. Arnaout
Ramy A. Arnaout
Eline T. Luning Prak
Nicholas Schwab
Florian Rubelt
the Adaptive Immune Receptor Repertoire Community
Ramy A. Arnaout
Rohit Arora
Rachael Bashford-Rogers
Felix Breden
Syed Ahmad Chan Bukhari
Brian Corrie
Lindsay G. Cowell
Sol Efroni
Christopher Gooley
Victor Greiff
Jason Vander Heiden
Yoshinobu Koguchi
Ton Langerak
Theam Soon Lim
Eline Luning Prak
Encarnita Mariotti-Ferrandiz
Susanna Marquez
Pieter Meysman
Enkelejda Miho
Keshav Motwani
Nima Nouri
Milena Pavlović
Florian Rubelt
Geir Kjetil Sandve
Nicholas Schwab
Igor Snapkov
Cinque Soto
Ulrik Stervbo
Johannes Trück
Henk-Jan van den Ham
Corey Watson
Cédric R. Weber
The Future of Blood Testing Is the Immunome
Frontiers in Immunology
adaptive immune receptor repertoire (AIRR)
diagnostic test
T-cell receptor repertoire
antibody repertoire
analyses
immunome
author_facet Ramy A. Arnaout
Ramy A. Arnaout
Eline T. Luning Prak
Nicholas Schwab
Florian Rubelt
the Adaptive Immune Receptor Repertoire Community
Ramy A. Arnaout
Rohit Arora
Rachael Bashford-Rogers
Felix Breden
Syed Ahmad Chan Bukhari
Brian Corrie
Lindsay G. Cowell
Sol Efroni
Christopher Gooley
Victor Greiff
Jason Vander Heiden
Yoshinobu Koguchi
Ton Langerak
Theam Soon Lim
Eline Luning Prak
Encarnita Mariotti-Ferrandiz
Susanna Marquez
Pieter Meysman
Enkelejda Miho
Keshav Motwani
Nima Nouri
Milena Pavlović
Florian Rubelt
Geir Kjetil Sandve
Nicholas Schwab
Igor Snapkov
Cinque Soto
Ulrik Stervbo
Johannes Trück
Henk-Jan van den Ham
Corey Watson
Cédric R. Weber
author_sort Ramy A. Arnaout
title The Future of Blood Testing Is the Immunome
title_short The Future of Blood Testing Is the Immunome
title_full The Future of Blood Testing Is the Immunome
title_fullStr The Future of Blood Testing Is the Immunome
title_full_unstemmed The Future of Blood Testing Is the Immunome
title_sort future of blood testing is the immunome
publisher Frontiers Media S.A.
series Frontiers in Immunology
issn 1664-3224
publishDate 2021-03-01
description It is increasingly clear that an extraordinarily diverse range of clinically important conditions—including infections, vaccinations, autoimmune diseases, transplants, transfusion reactions, aging, and cancers—leave telltale signatures in the millions of V(D)J-rearranged antibody and T cell receptor [TR per the Human Genome Organization (HUGO) nomenclature but more commonly known as TCR] genes collectively expressed by a person’s B cells (antibodies) and T cells. We refer to these as the immunome. Because of its diversity and complexity, the immunome provides singular opportunities for advancing personalized medicine by serving as the substrate for a highly multiplexed, near-universal blood test. Here we discuss some of these opportunities, the current state of immunome-based diagnostics, and highlight some of the challenges involved. We conclude with a call to clinicians, researchers, and others to join efforts with the Adaptive Immune Receptor Repertoire Community (AIRR-C) to realize the diagnostic potential of the immunome.
topic adaptive immune receptor repertoire (AIRR)
diagnostic test
T-cell receptor repertoire
antibody repertoire
analyses
immunome
url https://www.frontiersin.org/articles/10.3389/fimmu.2021.626793/full
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