Intrinsic noise analyzer: a software package for the exploration of stochastic biochemical kinetics using the system size expansion.
The accepted stochastic descriptions of biochemical dynamics under well-mixed conditions are given by the Chemical Master Equation and the Stochastic Simulation Algorithm, which are equivalent. The latter is a Monte-Carlo method, which, despite enjoying broad availability in a large number of existi...
Main Authors: | Philipp Thomas, Hannes Matuschek, Ramon Grima |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2012-01-01
|
Series: | PLoS ONE |
Online Access: | https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/22723865/pdf/?tool=EBI |
Similar Items
-
Inference for Stochastic Chemical Kinetics Using Moment Equations and System Size Expansion.
by: Fabian Fröhlich, et al.
Published: (2016-07-01) -
Analyze the noise distribution of IC packaging and testing plant by noise simulation software.
by: Shao-Fan Hsiung, et al.
Published: (2017) -
Asymmetric stochastic switching driven by intrinsic molecular noise.
by: David Frigola, et al.
Published: (2012-01-01) -
Physical decomposition of intrinsic and extrinsic noises in biochemical networks
by: Song, Cheng-Yan, et al.
Published: (2016) -
Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks
by: Elston Timothy C, et al.
Published: (2004-03-01)