Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5
Paenibacillus ihumii sp. nov. strain AT5 (= CSUR 1981 = DSM 100664) is the type strain of P. ihumii. This bacterium was isolated from a stool sample from a morbidly obese French patient using the culturomics approach. The genome of this Gram-negative, facultative anaerobic, motile and spore-forming...
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doaj-73e730653ee14c6e8be4c87982881f532020-11-24T22:08:51ZengElsevierNew Microbes and New Infections2052-29752016-03-0110C14215010.1016/j.nmni.2016.01.013Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5A.H. Togo0S. Khelaifia1J.-C. Lagier2A. Caputo3C. Robert4P.-E. Fournier5M. Maraninchi6R. Valero7D. Raoult8M. Million9Aix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, Marseille, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, Marseille, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, Marseille, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, Marseille, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, Marseille, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, Marseille, FranceAix Marseille Université, NORT “Nutrition, Obesity and Risk of Thrombosis”, INSERM1062, INRA1260, Marseille, FranceAix Marseille Université, NORT “Nutrition, Obesity and Risk of Thrombosis”, INSERM1062, INRA1260, Marseille, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, Marseille, FranceAix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, Marseille, FrancePaenibacillus ihumii sp. nov. strain AT5 (= CSUR 1981 = DSM 100664) is the type strain of P. ihumii. This bacterium was isolated from a stool sample from a morbidly obese French patient using the culturomics approach. The genome of this Gram-negative, facultative anaerobic, motile and spore-forming bacillus is 5 924 686 bp long. Genomic analysis identified 253 (5%) of 3812 genes as ORFans and at least 2599 (50.03%) of 5194 orthologous proteins not shared with the closest phylogenetic species.http://www.sciencedirect.com/science/article/pii/S2052297516000159CulturomicsgenomePaenibacillus ihumii sp. nov.taxonogenomics |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
A.H. Togo S. Khelaifia J.-C. Lagier A. Caputo C. Robert P.-E. Fournier M. Maraninchi R. Valero D. Raoult M. Million |
spellingShingle |
A.H. Togo S. Khelaifia J.-C. Lagier A. Caputo C. Robert P.-E. Fournier M. Maraninchi R. Valero D. Raoult M. Million Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5 New Microbes and New Infections Culturomics genome Paenibacillus ihumii sp. nov. taxonogenomics |
author_facet |
A.H. Togo S. Khelaifia J.-C. Lagier A. Caputo C. Robert P.-E. Fournier M. Maraninchi R. Valero D. Raoult M. Million |
author_sort |
A.H. Togo |
title |
Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5 |
title_short |
Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5 |
title_full |
Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5 |
title_fullStr |
Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5 |
title_full_unstemmed |
Noncontiguous finished genome sequence and description of Paenibacillus ihumii sp. nov. strain AT5 |
title_sort |
noncontiguous finished genome sequence and description of paenibacillus ihumii sp. nov. strain at5 |
publisher |
Elsevier |
series |
New Microbes and New Infections |
issn |
2052-2975 |
publishDate |
2016-03-01 |
description |
Paenibacillus ihumii sp. nov. strain AT5 (= CSUR 1981 = DSM 100664) is the type strain of P. ihumii. This bacterium was isolated from a stool sample from a morbidly obese French patient using the culturomics approach. The genome of this Gram-negative, facultative anaerobic, motile and spore-forming bacillus is 5 924 686 bp long. Genomic analysis identified 253 (5%) of 3812 genes as ORFans and at least 2599 (50.03%) of 5194 orthologous proteins not shared with the closest phylogenetic species. |
topic |
Culturomics genome Paenibacillus ihumii sp. nov. taxonogenomics |
url |
http://www.sciencedirect.com/science/article/pii/S2052297516000159 |
work_keys_str_mv |
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