Lattice Boltzmann Method in Modeling Biofilm Formation, Growth and Detachment

Biofilms are a complex and heterogeneous aggregation of multiple populations of microorganisms linked together by their excretion of extracellular polymer substances (EPS). Biofilms can cause many serious problems, such as chronic infections, food contamination and equipment corrosion, although they...

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Main Authors: Mojtaba Aghajani Delavar, Junye Wang
Format: Article
Language:English
Published: MDPI AG 2021-07-01
Series:Sustainability
Subjects:
Online Access:https://www.mdpi.com/2071-1050/13/14/7968
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spelling doaj-75d731d2c26a4d4eb440c46813190bc82021-07-23T14:08:22ZengMDPI AGSustainability2071-10502021-07-01137968796810.3390/su13147968Lattice Boltzmann Method in Modeling Biofilm Formation, Growth and DetachmentMojtaba Aghajani Delavar0Junye Wang1Faculty of Science and Technology, Athabasca University, Athabasca, AB T9S 3A3, CanadaFaculty of Science and Technology, Athabasca University, Athabasca, AB T9S 3A3, CanadaBiofilms are a complex and heterogeneous aggregation of multiple populations of microorganisms linked together by their excretion of extracellular polymer substances (EPS). Biofilms can cause many serious problems, such as chronic infections, food contamination and equipment corrosion, although they can be useful for constructive purposes, such as in wastewater treatment, heavy metal removal from hazardous waste sites, biofuel production, power generation through microbial fuel cells and microbially enhanced oil recovery; however, biofilm formation and growth are complex due to interactions among physicochemical and biological processes under operational and environmental conditions. Advanced numerical modeling techniques using the lattice Boltzmann method (LBM) are enabling the prediction of biofilm formation and growth and microbial community structures. This study is the first attempt to perform a general review on major contributions to LBM-based biofilm models, ranging from pioneering efforts to more recent progress. We present our understanding of the modeling of biofilm formation, growth and detachment using LBM-based models and present the fundamental aspects of various LBM-based biofilm models. We describe how the LBM couples with cellular automata (CA) and individual-based model (IbM) approaches and discuss their applications in assessing the spatiotemporal distribution of biofilms and their associated parameters and evaluating bioconversion efficiency. Finally, we discuss the main features and drawbacks of LBM-based biofilm models from ecological and biotechnological perspectives and identify current knowledge gaps and future research priorities.https://www.mdpi.com/2071-1050/13/14/7968biofilmlattice Boltzmann methodcellular automataindividual-based model
collection DOAJ
language English
format Article
sources DOAJ
author Mojtaba Aghajani Delavar
Junye Wang
spellingShingle Mojtaba Aghajani Delavar
Junye Wang
Lattice Boltzmann Method in Modeling Biofilm Formation, Growth and Detachment
Sustainability
biofilm
lattice Boltzmann method
cellular automata
individual-based model
author_facet Mojtaba Aghajani Delavar
Junye Wang
author_sort Mojtaba Aghajani Delavar
title Lattice Boltzmann Method in Modeling Biofilm Formation, Growth and Detachment
title_short Lattice Boltzmann Method in Modeling Biofilm Formation, Growth and Detachment
title_full Lattice Boltzmann Method in Modeling Biofilm Formation, Growth and Detachment
title_fullStr Lattice Boltzmann Method in Modeling Biofilm Formation, Growth and Detachment
title_full_unstemmed Lattice Boltzmann Method in Modeling Biofilm Formation, Growth and Detachment
title_sort lattice boltzmann method in modeling biofilm formation, growth and detachment
publisher MDPI AG
series Sustainability
issn 2071-1050
publishDate 2021-07-01
description Biofilms are a complex and heterogeneous aggregation of multiple populations of microorganisms linked together by their excretion of extracellular polymer substances (EPS). Biofilms can cause many serious problems, such as chronic infections, food contamination and equipment corrosion, although they can be useful for constructive purposes, such as in wastewater treatment, heavy metal removal from hazardous waste sites, biofuel production, power generation through microbial fuel cells and microbially enhanced oil recovery; however, biofilm formation and growth are complex due to interactions among physicochemical and biological processes under operational and environmental conditions. Advanced numerical modeling techniques using the lattice Boltzmann method (LBM) are enabling the prediction of biofilm formation and growth and microbial community structures. This study is the first attempt to perform a general review on major contributions to LBM-based biofilm models, ranging from pioneering efforts to more recent progress. We present our understanding of the modeling of biofilm formation, growth and detachment using LBM-based models and present the fundamental aspects of various LBM-based biofilm models. We describe how the LBM couples with cellular automata (CA) and individual-based model (IbM) approaches and discuss their applications in assessing the spatiotemporal distribution of biofilms and their associated parameters and evaluating bioconversion efficiency. Finally, we discuss the main features and drawbacks of LBM-based biofilm models from ecological and biotechnological perspectives and identify current knowledge gaps and future research priorities.
topic biofilm
lattice Boltzmann method
cellular automata
individual-based model
url https://www.mdpi.com/2071-1050/13/14/7968
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AT junyewang latticeboltzmannmethodinmodelingbiofilmformationgrowthanddetachment
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