Simulation of Fermentation Pathway Using Bees Algorithm

• Main Authors: Sigeru OMATU, Rosli ILLIAS, Safaai DERIS, Lian En CHAI, Chuii Khim CHONG, Mohd Saberi MOHAMAD, Yi Ying LEONG
• Format: Article
• Language: English
• Published: Ediciones Universidad de Salamanca 2013-07-01
• Series: Advances in Distributed Computing and Artificial Intelligence Journal
• Subjects: Parameter Estimation; Bees Algorithm; Simulation; Saccharomyces cerevisiae; Glucose; Glucose-6-Phosphate; Fermentation Pathway
• Online Access: http://campus.usal.es/~revistas_trabajo/index.php/2255-2863/article/view/10008
• ISSN: 2255-2863

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mso-tstyle-rowband-size:0;&#13; mso-tstyle-colband-size:0;&#13; mso-style-noshow:yes;&#13; mso-style-priority:99;&#13; mso-style-parent:"";&#13; mso-padding-alt:0cm 5.4pt 0cm 5.4pt;&#13; mso-para-margin:0cm;&#13; mso-para-margin-bottom:.0001pt;&#13; mso-pagination:widow-orphan;&#13; font-size:12.0pt;&#13; font-family:Cambria;&#13; mso-ascii-font-family:Cambria;&#13; mso-ascii-theme-font:minor-latin;&#13; mso-hansi-font-family:Cambria;&#13; mso-hansi-theme-font:minor-latin;&#13; mso-ansi-language:EN-US;}&#13; </style> <![endif]--> <!--StartFragment--> <p class="MsoNormal"><span style="font-size: 9.0pt; font-family: " lang="ES">In this paper, we propose Bees Algorithm (BA) to enhance the performance in estimating the parameters for metabolic pathway data to simulate fermentation pathway for Saccharomyces cerevisiae. However, the parameter estimation of biological processes has always been a challenging task due to the complexity and nonlinear equations. Therefore, we present this algorithm as a new approach for parameter estimation for biological interactions to obtain more accurate parameter values. The result shows that BA outperforms other estimation algorithms as it produces the most accurate kinetic parameters, which contributes to the precision of simulated kinetic model.</span></p> <!--EndFragment-->