RNAmap2D – calculation, visualization and analysis of contact and distance maps for RNA and protein-RNA complex structures

RNAmap2D – calculation, visualization and analysis of contact and distance maps for RNA and protein-RNA complex structures

<p>Abstract</p> <p>Background</p> <p>The structures of biological macromolecules provide a framework for studying their biological functions. Three-dimensional structures of proteins, nucleic acids, or their complexes, are difficult to visualize in detail on flat surfac...

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Bibliographic Details
Main Authors: Pietal Michal J, Szostak Natalia, Rother Kristian M, Bujnicki Janusz M
Format: Article
Language:English
Published: BMC 2012-12-01
Series:BMC Bioinformatics
Subjects:
Contact maps
Distance maps
RNA secondary structure
RNA base pairing
RNA stacking
Protein-RNA complex
Docking
Online Access:http://www.biomedcentral.com/1471-2105/13/333

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