Bridging global and local topology in whole-brain networks using the network statistic jackknife

Whole-brain network analysis is commonly used to investigate the topology of the brain using a variety of neuroimaging modalities. This approach is notable for its applicability to a large number of domains, such as understanding how brain network organization relates to cognit...

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Main Authors: Henry, Teague R., Duffy, Kelly A., Rudolph, Marc D., Nebel, Mary Beth, Mostofsky, Stewart H., Cohen, Jessica R.
Format: Article
Language:English
Published: The MIT Press 2020-01-01
Series:Network Neuroscience
Online Access:https://www.mitpressjournals.org/doi/abs/10.1162/netn_a_00109
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spelling doaj-768249c889ce46d08203e18c25876c342020-11-25T02:43:11ZengThe MIT PressNetwork Neuroscience2472-17512020-01-0141708810.1162/netn_a_00109Bridging global and local topology in whole-brain networks using the network statistic jackknifeHenry, Teague R.Duffy, Kelly A.Rudolph, Marc D.Nebel, Mary BethMostofsky, Stewart H.Cohen, Jessica R. Whole-brain network analysis is commonly used to investigate the topology of the brain using a variety of neuroimaging modalities. This approach is notable for its applicability to a large number of domains, such as understanding how brain network organization relates to cognition and behavior and examining disrupted brain network organization in disease. A benefit to this approach is the ability to summarize overall brain network organization with a single metric (e.g., global efficiency). However, important local differences in network structure might exist without any corresponding observable differences in global topology, making a whole-brain analysis strategy unlikely to detect relevant local findings. Conversely, using local network metrics can identify local differences, but are not directly informative of differences in global topology. Here, we propose the network statistic (NS) jackknife framework, a simulated lesioning method that combines the utility of global network analysis strategies with the ability to detect relevant local differences in network structure. We evaluate the NS jackknife framework with a simulation study and an empirical example comparing global efficiency in children with attention-deficit/hyperactivity disorder (ADHD) and typically developing (TD) children. The NS jackknife framework has been implemented in a public, open-source R package, netjack, available at https://cran.r-project.org/package=netjack . https://www.mitpressjournals.org/doi/abs/10.1162/netn_a_00109
collection DOAJ
language English
format Article
sources DOAJ
author Henry, Teague R.
Duffy, Kelly A.
Rudolph, Marc D.
Nebel, Mary Beth
Mostofsky, Stewart H.
Cohen, Jessica R.
spellingShingle Henry, Teague R.
Duffy, Kelly A.
Rudolph, Marc D.
Nebel, Mary Beth
Mostofsky, Stewart H.
Cohen, Jessica R.
Bridging global and local topology in whole-brain networks using the network statistic jackknife
Network Neuroscience
author_facet Henry, Teague R.
Duffy, Kelly A.
Rudolph, Marc D.
Nebel, Mary Beth
Mostofsky, Stewart H.
Cohen, Jessica R.
author_sort Henry, Teague R.
title Bridging global and local topology in whole-brain networks using the network statistic jackknife
title_short Bridging global and local topology in whole-brain networks using the network statistic jackknife
title_full Bridging global and local topology in whole-brain networks using the network statistic jackknife
title_fullStr Bridging global and local topology in whole-brain networks using the network statistic jackknife
title_full_unstemmed Bridging global and local topology in whole-brain networks using the network statistic jackknife
title_sort bridging global and local topology in whole-brain networks using the network statistic jackknife
publisher The MIT Press
series Network Neuroscience
issn 2472-1751
publishDate 2020-01-01
description Whole-brain network analysis is commonly used to investigate the topology of the brain using a variety of neuroimaging modalities. This approach is notable for its applicability to a large number of domains, such as understanding how brain network organization relates to cognition and behavior and examining disrupted brain network organization in disease. A benefit to this approach is the ability to summarize overall brain network organization with a single metric (e.g., global efficiency). However, important local differences in network structure might exist without any corresponding observable differences in global topology, making a whole-brain analysis strategy unlikely to detect relevant local findings. Conversely, using local network metrics can identify local differences, but are not directly informative of differences in global topology. Here, we propose the network statistic (NS) jackknife framework, a simulated lesioning method that combines the utility of global network analysis strategies with the ability to detect relevant local differences in network structure. We evaluate the NS jackknife framework with a simulation study and an empirical example comparing global efficiency in children with attention-deficit/hyperactivity disorder (ADHD) and typically developing (TD) children. The NS jackknife framework has been implemented in a public, open-source R package, netjack, available at https://cran.r-project.org/package=netjack .
url https://www.mitpressjournals.org/doi/abs/10.1162/netn_a_00109
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