Radiogenomic analysis of vascular endothelial growth factor in patients with diffuse gliomas

• Main Authors: Zhiyan Sun, Yiming Li, Yinyan Wang, Xing Fan, Kaibin Xu, Kai Wang, Shaowu Li, Zhong Zhang, Tao Jiang, Xing Liu
• Format: Article
• Language: English
• Published: BMC 2019-10-01
• Series: Cancer Imaging
• Subjects: Vascular endothelial growth factor; Diffuse gliomas; Radiomic analysis; Machine learning
• Online Access: http://link.springer.com/article/10.1186/s40644-019-0256-y

Abstract Objective To predict vascular endothelial growth factor (VEGF) expression in patients with diffuse gliomas using radiomic analysis. Materials and methods Preoperative magnetic resonance images were retrospectively obtained from 239 patients with diffuse gliomas (World Health Organization grades II–IV). The patients were randomly assigned to a training group (n = 160) or a validation group (n = 79) at a 2:1 ratio. For each patient, a total of 431 radiomic features were extracted. The minimum redundancy maximum relevance (mRMR) algorithm was used for feature selection. A machine-learning model for predicting VEGF status was then developed using the selected features and a support vector machine classifier. The predictive performance of the model was evaluated in both groups using receiver operating characteristic curve analysis, and correlations between selected features were assessed. Results Nine radiomic features were selected to generate a VEGF-associated radiomic signature of diffuse gliomas based on the mRMR algorithm. This radiomic signature consisted of two first-order statistics or related wavelet features (Entropy and Minimum) and seven textural features or related wavelet features (including Cluster Tendency and Long Run Low Gray Level Emphasis). The predictive efficiencies measured by the area under the curve were 74.1% in the training group and 70.2% in the validation group. The overall correlations between the 9 radiomic features were low in both groups. Conclusions Radiomic analysis facilitated efficient prediction of VEGF status in diffuse gliomas, suggesting that using tumor-derived radiomic features for predicting genomic information is feasible.