Complete Mitochondrial Genomes of Two Toxin-Accumulated Nassariids (Neogastropoda: Nassariidae: <i>Nassarius</i>) and Their Implication for Phylogeny

The Indo-Pacific nassariids (genus <i>Nassarius</i>) possesses the highest diversity within the family Nassariidae. However, the previous shell or radula-based classification of <i>Nassarius</i> is quite confusing due to the homoplasy of certain morphological characteristics....

Full description

Bibliographic Details
Main Authors: Yi Yang, Hongyue Liu, Lu Qi, Lingfeng Kong, Qi Li
Format: Article
Language:English
Published: MDPI AG 2020-05-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/21/10/3545
id doaj-7a611ffd423849d8b9a8c59506fd7e11
record_format Article
spelling doaj-7a611ffd423849d8b9a8c59506fd7e112020-11-25T03:27:20ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672020-05-01213545354510.3390/ijms21103545Complete Mitochondrial Genomes of Two Toxin-Accumulated Nassariids (Neogastropoda: Nassariidae: <i>Nassarius</i>) and Their Implication for PhylogenyYi Yang0Hongyue Liu1Lu Qi2Lingfeng Kong3Qi Li4Key Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao 266003, ChinaKey Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao 266003, ChinaKey Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao 266003, ChinaKey Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao 266003, ChinaKey Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao 266003, ChinaThe Indo-Pacific nassariids (genus <i>Nassarius</i>) possesses the highest diversity within the family Nassariidae. However, the previous shell or radula-based classification of <i>Nassarius</i> is quite confusing due to the homoplasy of certain morphological characteristics. The toxin accumulators <i>Nassarius glans</i> and <i>Nassarius siquijorensis</i> are widely distributed in the subtidal regions of the Indo-Pacific Ocean. In spite of their biological significance, the phylogenetic positions of <i>N</i>. <i>glans</i> and <i>N</i>. <i>siquijorensis</i> are still undetermined. In the present study, the complete mitochondrial genomes of <i>N</i>. <i>glans</i> and <i>N</i>. <i>siquijorensis</i> were sequenced. The present mitochondrial genomes were 15,296 and 15,337 bp in length, respectively, showing negative AT skews and positive GC skews as well as a bias of AT rich on the heavy strand. They contained 13 protein coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and several noncoding regions, and their gene order was identical to most caenogastropods. Based on the nucleotide sequences combining 13 protein coding genes and two rRNA genes, a well-supported phylogeny of <i>Nassarius</i> was reconstructed, and several morphological synapomorphies were observed corresponding to the phylogenetic framework. In addition, the sister group relationship between <i>N. variciferus</i> and the remaining toxin-accumulated nassariids was determined, suggesting that the phylogeny might be related to their diet. The divergence time estimation analysis revealed a correlation between speciation events of nassariids and glacial cycles during the Pliocene-Pleistocene epoch.https://www.mdpi.com/1422-0067/21/10/3545<i>Nassarius glans</i><i>Nassarius siquijorensis</i>mitochondrial genomephylogenymorphological synapomorphiestoxin
collection DOAJ
language English
format Article
sources DOAJ
author Yi Yang
Hongyue Liu
Lu Qi
Lingfeng Kong
Qi Li
spellingShingle Yi Yang
Hongyue Liu
Lu Qi
Lingfeng Kong
Qi Li
Complete Mitochondrial Genomes of Two Toxin-Accumulated Nassariids (Neogastropoda: Nassariidae: <i>Nassarius</i>) and Their Implication for Phylogeny
International Journal of Molecular Sciences
<i>Nassarius glans</i>
<i>Nassarius siquijorensis</i>
mitochondrial genome
phylogeny
morphological synapomorphies
toxin
author_facet Yi Yang
Hongyue Liu
Lu Qi
Lingfeng Kong
Qi Li
author_sort Yi Yang
title Complete Mitochondrial Genomes of Two Toxin-Accumulated Nassariids (Neogastropoda: Nassariidae: <i>Nassarius</i>) and Their Implication for Phylogeny
title_short Complete Mitochondrial Genomes of Two Toxin-Accumulated Nassariids (Neogastropoda: Nassariidae: <i>Nassarius</i>) and Their Implication for Phylogeny
title_full Complete Mitochondrial Genomes of Two Toxin-Accumulated Nassariids (Neogastropoda: Nassariidae: <i>Nassarius</i>) and Their Implication for Phylogeny
title_fullStr Complete Mitochondrial Genomes of Two Toxin-Accumulated Nassariids (Neogastropoda: Nassariidae: <i>Nassarius</i>) and Their Implication for Phylogeny
title_full_unstemmed Complete Mitochondrial Genomes of Two Toxin-Accumulated Nassariids (Neogastropoda: Nassariidae: <i>Nassarius</i>) and Their Implication for Phylogeny
title_sort complete mitochondrial genomes of two toxin-accumulated nassariids (neogastropoda: nassariidae: <i>nassarius</i>) and their implication for phylogeny
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1661-6596
1422-0067
publishDate 2020-05-01
description The Indo-Pacific nassariids (genus <i>Nassarius</i>) possesses the highest diversity within the family Nassariidae. However, the previous shell or radula-based classification of <i>Nassarius</i> is quite confusing due to the homoplasy of certain morphological characteristics. The toxin accumulators <i>Nassarius glans</i> and <i>Nassarius siquijorensis</i> are widely distributed in the subtidal regions of the Indo-Pacific Ocean. In spite of their biological significance, the phylogenetic positions of <i>N</i>. <i>glans</i> and <i>N</i>. <i>siquijorensis</i> are still undetermined. In the present study, the complete mitochondrial genomes of <i>N</i>. <i>glans</i> and <i>N</i>. <i>siquijorensis</i> were sequenced. The present mitochondrial genomes were 15,296 and 15,337 bp in length, respectively, showing negative AT skews and positive GC skews as well as a bias of AT rich on the heavy strand. They contained 13 protein coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and several noncoding regions, and their gene order was identical to most caenogastropods. Based on the nucleotide sequences combining 13 protein coding genes and two rRNA genes, a well-supported phylogeny of <i>Nassarius</i> was reconstructed, and several morphological synapomorphies were observed corresponding to the phylogenetic framework. In addition, the sister group relationship between <i>N. variciferus</i> and the remaining toxin-accumulated nassariids was determined, suggesting that the phylogeny might be related to their diet. The divergence time estimation analysis revealed a correlation between speciation events of nassariids and glacial cycles during the Pliocene-Pleistocene epoch.
topic <i>Nassarius glans</i>
<i>Nassarius siquijorensis</i>
mitochondrial genome
phylogeny
morphological synapomorphies
toxin
url https://www.mdpi.com/1422-0067/21/10/3545
work_keys_str_mv AT yiyang completemitochondrialgenomesoftwotoxinaccumulatednassariidsneogastropodanassariidaeinassariusiandtheirimplicationforphylogeny
AT hongyueliu completemitochondrialgenomesoftwotoxinaccumulatednassariidsneogastropodanassariidaeinassariusiandtheirimplicationforphylogeny
AT luqi completemitochondrialgenomesoftwotoxinaccumulatednassariidsneogastropodanassariidaeinassariusiandtheirimplicationforphylogeny
AT lingfengkong completemitochondrialgenomesoftwotoxinaccumulatednassariidsneogastropodanassariidaeinassariusiandtheirimplicationforphylogeny
AT qili completemitochondrialgenomesoftwotoxinaccumulatednassariidsneogastropodanassariidaeinassariusiandtheirimplicationforphylogeny
_version_ 1724588171363090432