Identification of Proteins of Altered Abundance in Oil Palm Infected with Ganoderma boninense
Basal stem rot is a common disease that affects oil palm, causing loss of yield and finally killing the trees. The disease, caused by fungus Ganoderma boninense, devastates thousands of hectares of oil palm plantings in Southeast Asia every year. In the present study, root proteins of healthy oil p...
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doaj-7b3491fc06d04229919343fdab18147f2020-11-25T01:08:00ZengMDPI AGInternational Journal of Molecular Sciences1422-00672014-03-011535175519210.3390/ijms15035175ijms15035175Identification of Proteins of Altered Abundance in Oil Palm Infected with Ganoderma boninenseJameel R. Al-Obaidi0Yusmin Mohd-Yusuf1Nurhanani Razali2Jaime Jacqueline Jayapalan3Chin-Chong Tey4Normahnani Md-Noh5Sarni Mat Junit6Rofina Yasmin Othman7Onn Haji Hashim8Agro-Biotechnology Malaysia Institutes, c/o MARDI Headquarters, Serdang 43400, Selangor, MalaysiaCentre for Foundation Studies in Science, University of Malaya, Kuala Lumpur 50603, MalaysiaDepartment of Molecular Medicine, Faculty of Medicine, University of Malaya, Kuala Lumpur 50603, MalaysiaUniversity of Malaya Centre for Proteomics Research (UMCPR), University of Malaya, Kuala Lumpur 50603, MalaysiaPlant Protection Unit, Sime Darby Sdn Bhd, Km 10, Jalan Banting Kelanang, P.O. Box 207, Banting 42100, Selangor, MalaysiaPlant Protection Unit, Sime Darby Sdn Bhd, Km 10, Jalan Banting Kelanang, P.O. Box 207, Banting 42100, Selangor, MalaysiaDepartment of Molecular Medicine, Faculty of Medicine, University of Malaya, Kuala Lumpur 50603, MalaysiaCentre for Research in Biotechnology for Agriculture, University of Malaya, Kuala Lumpur 50603, MalaysiaDepartment of Molecular Medicine, Faculty of Medicine, University of Malaya, Kuala Lumpur 50603, MalaysiaBasal stem rot is a common disease that affects oil palm, causing loss of yield and finally killing the trees. The disease, caused by fungus Ganoderma boninense, devastates thousands of hectares of oil palm plantings in Southeast Asia every year. In the present study, root proteins of healthy oil palm seedlings, and those infected with G. boninense, were analyzed by 2-dimensional gel electrophoresis (2-DE). When the 2-DE profiles were analyzed for proteins, which exhibit consistent significant change of abundance upon infection with G. boninense, 21 passed our screening criteria. Subsequent analyses by mass spectrometry and database search identified caffeoyl-CoA O-methyltransferase, caffeic acid O-methyltransferase, enolase, fructokinase, cysteine synthase, malate dehydrogenase, and ATP synthase as among proteins of which abundances were markedly altered.http://www.mdpi.com/1422-0067/15/3/5175basal stem rotGanoderma boninensebiomarkeroil palmtwo-dimensional gel electrophoresisESI-TRAP |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Jameel R. Al-Obaidi Yusmin Mohd-Yusuf Nurhanani Razali Jaime Jacqueline Jayapalan Chin-Chong Tey Normahnani Md-Noh Sarni Mat Junit Rofina Yasmin Othman Onn Haji Hashim |
spellingShingle |
Jameel R. Al-Obaidi Yusmin Mohd-Yusuf Nurhanani Razali Jaime Jacqueline Jayapalan Chin-Chong Tey Normahnani Md-Noh Sarni Mat Junit Rofina Yasmin Othman Onn Haji Hashim Identification of Proteins of Altered Abundance in Oil Palm Infected with Ganoderma boninense International Journal of Molecular Sciences basal stem rot Ganoderma boninense biomarker oil palm two-dimensional gel electrophoresis ESI-TRAP |
author_facet |
Jameel R. Al-Obaidi Yusmin Mohd-Yusuf Nurhanani Razali Jaime Jacqueline Jayapalan Chin-Chong Tey Normahnani Md-Noh Sarni Mat Junit Rofina Yasmin Othman Onn Haji Hashim |
author_sort |
Jameel R. Al-Obaidi |
title |
Identification of Proteins of Altered Abundance in Oil Palm Infected with Ganoderma boninense |
title_short |
Identification of Proteins of Altered Abundance in Oil Palm Infected with Ganoderma boninense |
title_full |
Identification of Proteins of Altered Abundance in Oil Palm Infected with Ganoderma boninense |
title_fullStr |
Identification of Proteins of Altered Abundance in Oil Palm Infected with Ganoderma boninense |
title_full_unstemmed |
Identification of Proteins of Altered Abundance in Oil Palm Infected with Ganoderma boninense |
title_sort |
identification of proteins of altered abundance in oil palm infected with ganoderma boninense |
publisher |
MDPI AG |
series |
International Journal of Molecular Sciences |
issn |
1422-0067 |
publishDate |
2014-03-01 |
description |
Basal stem rot is a common disease that affects oil palm, causing loss of yield and finally killing the trees. The disease, caused by fungus Ganoderma boninense, devastates thousands of hectares of oil palm plantings in Southeast Asia every year. In the present study, root proteins of healthy oil palm seedlings, and those infected with G. boninense, were analyzed by 2-dimensional gel electrophoresis (2-DE). When the 2-DE profiles were analyzed for proteins, which exhibit consistent significant change of abundance upon infection with G. boninense, 21 passed our screening criteria. Subsequent analyses by mass spectrometry and database search identified caffeoyl-CoA O-methyltransferase, caffeic acid O-methyltransferase, enolase, fructokinase, cysteine synthase, malate dehydrogenase, and ATP synthase as among proteins of which abundances were markedly altered. |
topic |
basal stem rot Ganoderma boninense biomarker oil palm two-dimensional gel electrophoresis ESI-TRAP |
url |
http://www.mdpi.com/1422-0067/15/3/5175 |
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