Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population

Abstract This study aimed to determine the association between the polymorphisms and haplotypes in the xeroderma pigmentosum group D (XPD) gene and the risk of pancreatic cancer in the Chinese Han population. SNaPshot was used for genotyping six SNP sites of the XPD gene. Comparisons of the correlat...

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Main Authors: Dong Yan, Xiao-Hui Liang, Wei Ding, Xin-Jian Xu, Xi-Yan Wang
Format: Article
Language:English
Published: Sociedade Brasileira de Genética 2017-12-01
Series:Genetics and Molecular Biology
Subjects:
Online Access:http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017005028101&lng=en&tlng=en
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spelling doaj-7b5d2e14e4a746f09ea85c1d73d225d92020-11-24T21:11:04ZengSociedade Brasileira de GenéticaGenetics and Molecular Biology1678-46852017-12-01010.1590/1678-4685-gmb-2017-0033S1415-47572017005028101Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han populationDong YanXiao-Hui LiangWei DingXin-Jian XuXi-Yan WangAbstract This study aimed to determine the association between the polymorphisms and haplotypes in the xeroderma pigmentosum group D (XPD) gene and the risk of pancreatic cancer in the Chinese Han population. SNaPshot was used for genotyping six SNP sites of the XPD gene. Comparisons of the correlations between different genotypes in combination with smoking and the susceptibility to pancreatic cancer were performed. Individual pancreatic cancer risk in patients who carry mutant C alleles (AC, CC, and AC+CC) at rs13181 increased (p < 0.05). Taking non-smoking individuals who carry the AA genotype as a reference, and non-smoking individuals who carry mutant allele C (AC+CC), the risk of pancreatic cancer increased by 3.343 times in individuals who smoked ≥ 20 cigarettes daily, 3.309 times in individuals who smoked ≥ 14 packs per year, 5.011 times in individuals who smoked ≥ 24 packs per year, and 4.013 times in the individuals who smoked ≥ 37 packs per year (P < 0.05). In addition, haplotype analysis revealed that haplotype AGG, which comprised rs13181, rs3916874 and rs238415, was associated with a 1.401-fold increase in pancreatic cancer risk (p < 0.05). We conclude that the polymorphism of XPD Lys751Gln (rs13181) in combination with smoking contributes to increased risk of pancreatic cancer in the Chinese Han population. Haplotype AGG might be a susceptibility haplotype for pancreatic cancer.http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017005028101&lng=en&tlng=enPancreatic neoplasmhuman xeroderma pigmentosum group Dpolymorphismsmoking
collection DOAJ
language English
format Article
sources DOAJ
author Dong Yan
Xiao-Hui Liang
Wei Ding
Xin-Jian Xu
Xi-Yan Wang
spellingShingle Dong Yan
Xiao-Hui Liang
Wei Ding
Xin-Jian Xu
Xi-Yan Wang
Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population
Genetics and Molecular Biology
Pancreatic neoplasm
human xeroderma pigmentosum group D
polymorphism
smoking
author_facet Dong Yan
Xiao-Hui Liang
Wei Ding
Xin-Jian Xu
Xi-Yan Wang
author_sort Dong Yan
title Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population
title_short Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population
title_full Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population
title_fullStr Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population
title_full_unstemmed Contribution of DNA repair xeroderma pigmentosum group D genotypes to pancreatic cancer risk in the Chinese Han population
title_sort contribution of dna repair xeroderma pigmentosum group d genotypes to pancreatic cancer risk in the chinese han population
publisher Sociedade Brasileira de Genética
series Genetics and Molecular Biology
issn 1678-4685
publishDate 2017-12-01
description Abstract This study aimed to determine the association between the polymorphisms and haplotypes in the xeroderma pigmentosum group D (XPD) gene and the risk of pancreatic cancer in the Chinese Han population. SNaPshot was used for genotyping six SNP sites of the XPD gene. Comparisons of the correlations between different genotypes in combination with smoking and the susceptibility to pancreatic cancer were performed. Individual pancreatic cancer risk in patients who carry mutant C alleles (AC, CC, and AC+CC) at rs13181 increased (p < 0.05). Taking non-smoking individuals who carry the AA genotype as a reference, and non-smoking individuals who carry mutant allele C (AC+CC), the risk of pancreatic cancer increased by 3.343 times in individuals who smoked ≥ 20 cigarettes daily, 3.309 times in individuals who smoked ≥ 14 packs per year, 5.011 times in individuals who smoked ≥ 24 packs per year, and 4.013 times in the individuals who smoked ≥ 37 packs per year (P < 0.05). In addition, haplotype analysis revealed that haplotype AGG, which comprised rs13181, rs3916874 and rs238415, was associated with a 1.401-fold increase in pancreatic cancer risk (p < 0.05). We conclude that the polymorphism of XPD Lys751Gln (rs13181) in combination with smoking contributes to increased risk of pancreatic cancer in the Chinese Han population. Haplotype AGG might be a susceptibility haplotype for pancreatic cancer.
topic Pancreatic neoplasm
human xeroderma pigmentosum group D
polymorphism
smoking
url http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017005028101&lng=en&tlng=en
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