Sources and Assembly of Microbial Communities in Vineyards as a Functional Component of Winegrowing

Microbiomes are integral to viticulture and winemaking – collectively termed winegrowing – where diverse fungi and bacteria can exert positive and negative effects on grape health and wine quality. Wine is a fermented natural product, and the vineyard serves as a key point of entry for quality-modul...

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Main Authors: Reid G. Griggs, Kerri L. Steenwerth, David A. Mills, Dario Cantu, Nicholas A. Bokulich
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-04-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2021.673810/full
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spelling doaj-7b865150969f4dd0a8e53661cb2825522021-04-13T05:22:25ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2021-04-011210.3389/fmicb.2021.673810673810Sources and Assembly of Microbial Communities in Vineyards as a Functional Component of WinegrowingReid G. Griggs0Kerri L. Steenwerth1David A. Mills2David A. Mills3David A. Mills4Dario Cantu5Nicholas A. Bokulich6Department of Viticulture and Enology, Robert Mondavi Institute for Wine and Food Science, University of California, Davis, Davis, CA, United StatesUSDA-ARS, Crops Pathology and Genetics Research Unit, Department of Land, Air and Water Resources, University of California, Davis, Davis, CA, United StatesDepartment of Viticulture and Enology, Robert Mondavi Institute for Wine and Food Science, University of California, Davis, Davis, CA, United StatesDepartment of Food Science and Technology, Robert Mondavi Institute for Wine and Food Science, University of California, Davis, Davis, CA, United StatesFoods for Health Institute, University of California, Davis, Davis, CA, United StatesDepartment of Viticulture and Enology, Robert Mondavi Institute for Wine and Food Science, University of California, Davis, Davis, CA, United StatesLaboratory of Food Systems Biotechnology, Institute of Food, Nutrition and Health, ETH Zurich, Zurich, SwitzerlandMicrobiomes are integral to viticulture and winemaking – collectively termed winegrowing – where diverse fungi and bacteria can exert positive and negative effects on grape health and wine quality. Wine is a fermented natural product, and the vineyard serves as a key point of entry for quality-modulating microbiota, particularly in wine fermentations that are conducted without the addition of exogenous yeasts. Thus, the sources and persistence of wine-relevant microbiota in vineyards critically impact its quality. Site-specific variations in microbiota within and between vineyards may contribute to regional wine characteristics. This includes distinctions in microbiomes and microbiota at the strain level, which can contribute to wine flavor and aroma, supporting the role of microbes in the accepted notion of terroir as a biological phenomenon. Little is known about the factors driving microbial biodiversity within and between vineyards, or those that influence annual assembly of the fruit microbiome. Fruit is a seasonally ephemeral, yet annually recurrent product of vineyards, and as such, understanding the sources of microbiota in vineyards is critical to the assessment of whether or not microbial terroir persists with inter-annual stability, and is a key factor in regional wine character, as stable as the geographic distances between vineyards. This review examines the potential sources and vectors of microbiota within vineyards, general rules governing plant microbiome assembly, and how these factors combine to influence plant-microbe interactions relevant to winemaking.https://www.frontiersin.org/articles/10.3389/fmicb.2021.673810/fullviticultureterroirmicrobial ecologymicrobiomemetagenomicsmicrobial dispersal
collection DOAJ
language English
format Article
sources DOAJ
author Reid G. Griggs
Kerri L. Steenwerth
David A. Mills
David A. Mills
David A. Mills
Dario Cantu
Nicholas A. Bokulich
spellingShingle Reid G. Griggs
Kerri L. Steenwerth
David A. Mills
David A. Mills
David A. Mills
Dario Cantu
Nicholas A. Bokulich
Sources and Assembly of Microbial Communities in Vineyards as a Functional Component of Winegrowing
Frontiers in Microbiology
viticulture
terroir
microbial ecology
microbiome
metagenomics
microbial dispersal
author_facet Reid G. Griggs
Kerri L. Steenwerth
David A. Mills
David A. Mills
David A. Mills
Dario Cantu
Nicholas A. Bokulich
author_sort Reid G. Griggs
title Sources and Assembly of Microbial Communities in Vineyards as a Functional Component of Winegrowing
title_short Sources and Assembly of Microbial Communities in Vineyards as a Functional Component of Winegrowing
title_full Sources and Assembly of Microbial Communities in Vineyards as a Functional Component of Winegrowing
title_fullStr Sources and Assembly of Microbial Communities in Vineyards as a Functional Component of Winegrowing
title_full_unstemmed Sources and Assembly of Microbial Communities in Vineyards as a Functional Component of Winegrowing
title_sort sources and assembly of microbial communities in vineyards as a functional component of winegrowing
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2021-04-01
description Microbiomes are integral to viticulture and winemaking – collectively termed winegrowing – where diverse fungi and bacteria can exert positive and negative effects on grape health and wine quality. Wine is a fermented natural product, and the vineyard serves as a key point of entry for quality-modulating microbiota, particularly in wine fermentations that are conducted without the addition of exogenous yeasts. Thus, the sources and persistence of wine-relevant microbiota in vineyards critically impact its quality. Site-specific variations in microbiota within and between vineyards may contribute to regional wine characteristics. This includes distinctions in microbiomes and microbiota at the strain level, which can contribute to wine flavor and aroma, supporting the role of microbes in the accepted notion of terroir as a biological phenomenon. Little is known about the factors driving microbial biodiversity within and between vineyards, or those that influence annual assembly of the fruit microbiome. Fruit is a seasonally ephemeral, yet annually recurrent product of vineyards, and as such, understanding the sources of microbiota in vineyards is critical to the assessment of whether or not microbial terroir persists with inter-annual stability, and is a key factor in regional wine character, as stable as the geographic distances between vineyards. This review examines the potential sources and vectors of microbiota within vineyards, general rules governing plant microbiome assembly, and how these factors combine to influence plant-microbe interactions relevant to winemaking.
topic viticulture
terroir
microbial ecology
microbiome
metagenomics
microbial dispersal
url https://www.frontiersin.org/articles/10.3389/fmicb.2021.673810/full
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