Characterization of Ocimum tenuiflorum (Linn.) Morpho-types Using RAPD Markers

Ocimum tenuiflorum Linn. (Lamiaceae) is an aromatic plant with a lot of potential medicinally, industrially and domestically. There are different morpho-types of O. tenuiflorum, with different shades of purple pigment on their leaves. Very few studies have been done to study the genetic variation amo...

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Main Authors: James T. OPOOLA, Matthew OZIEGBE
Format: Article
Language:English
Published: University of Agricultural Sciences and Veterinary Medicine, Cluj-Napoca 2019-12-01
Series:Notulae Scientia Biologicae
Subjects:
Online Access:https://www.notulaebiologicae.ro/index.php/nsb/article/view/10590
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spelling doaj-7b8faca7826641ba99211f3124513c402020-11-25T01:15:25ZengUniversity of Agricultural Sciences and Veterinary Medicine, Cluj-NapocaNotulae Scientia Biologicae2067-32052067-32642019-12-0111410.15835/nsb11410590Characterization of Ocimum tenuiflorum (Linn.) Morpho-types Using RAPD MarkersJames T. OPOOLA0Matthew OZIEGBE1Obafemi Awolowo University, Faculty of Science, Department of Botany, Ile-IfeObafemi Awolowo University, Faculty of Science, Department of Botany, Ile-IfeOcimum tenuiflorum Linn. (Lamiaceae) is an aromatic plant with a lot of potential medicinally, industrially and domestically. There are different morpho-types of O. tenuiflorum, with different shades of purple pigment on their leaves. Very few studies have been done to study the genetic variation among O. tenuiflorum morpho-types. Thus, in the present study, four O. tenuiflorum morpho-types that varied in pigmentation were characterised using RAPD marker as a molecular tool. Eight different primers collectively amplified 64 bands in the four morpho-types analysed. The RAPD technique revealed that the varied amount of purple pigment in O. tenuiflorum morpho-types is not due to environmental factor alone. The UPGMA clustering algorithm based on RAPD data grouped the four morpho-types into two major groups, with O. tenuiflorum (T2) with very light purple leaves and stem morpho-type, more related to O. tenuiflorum (T3) that have deep purple leaves and stem. The result was able to show the phylogenetic relationships within the species. The low level of genetic diversity observed in O. tenuiflorum can be attributed to the mode of reproduction and the reproductive biology of the species, due to the fact that they are likely to be natural hybrids produced through cross pollination. https://www.notulaebiologicae.ro/index.php/nsb/article/view/10590morpho types; Ocimum tenuiflorum; primers; RAPD
collection DOAJ
language English
format Article
sources DOAJ
author James T. OPOOLA
Matthew OZIEGBE
spellingShingle James T. OPOOLA
Matthew OZIEGBE
Characterization of Ocimum tenuiflorum (Linn.) Morpho-types Using RAPD Markers
Notulae Scientia Biologicae
morpho types; Ocimum tenuiflorum; primers; RAPD
author_facet James T. OPOOLA
Matthew OZIEGBE
author_sort James T. OPOOLA
title Characterization of Ocimum tenuiflorum (Linn.) Morpho-types Using RAPD Markers
title_short Characterization of Ocimum tenuiflorum (Linn.) Morpho-types Using RAPD Markers
title_full Characterization of Ocimum tenuiflorum (Linn.) Morpho-types Using RAPD Markers
title_fullStr Characterization of Ocimum tenuiflorum (Linn.) Morpho-types Using RAPD Markers
title_full_unstemmed Characterization of Ocimum tenuiflorum (Linn.) Morpho-types Using RAPD Markers
title_sort characterization of ocimum tenuiflorum (linn.) morpho-types using rapd markers
publisher University of Agricultural Sciences and Veterinary Medicine, Cluj-Napoca
series Notulae Scientia Biologicae
issn 2067-3205
2067-3264
publishDate 2019-12-01
description Ocimum tenuiflorum Linn. (Lamiaceae) is an aromatic plant with a lot of potential medicinally, industrially and domestically. There are different morpho-types of O. tenuiflorum, with different shades of purple pigment on their leaves. Very few studies have been done to study the genetic variation among O. tenuiflorum morpho-types. Thus, in the present study, four O. tenuiflorum morpho-types that varied in pigmentation were characterised using RAPD marker as a molecular tool. Eight different primers collectively amplified 64 bands in the four morpho-types analysed. The RAPD technique revealed that the varied amount of purple pigment in O. tenuiflorum morpho-types is not due to environmental factor alone. The UPGMA clustering algorithm based on RAPD data grouped the four morpho-types into two major groups, with O. tenuiflorum (T2) with very light purple leaves and stem morpho-type, more related to O. tenuiflorum (T3) that have deep purple leaves and stem. The result was able to show the phylogenetic relationships within the species. The low level of genetic diversity observed in O. tenuiflorum can be attributed to the mode of reproduction and the reproductive biology of the species, due to the fact that they are likely to be natural hybrids produced through cross pollination.
topic morpho types; Ocimum tenuiflorum; primers; RAPD
url https://www.notulaebiologicae.ro/index.php/nsb/article/view/10590
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