Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation.

Plasmodium actins form very short filaments and have a noncanonical link between ATP hydrolysis and polymerization. Long filaments are detrimental to the parasites, but the structural factors constraining Plasmodium microfilament lengths have remained unknown. Using high-resolution crystallography,...

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Main Authors: Esa-Pekka Kumpula, Andrea J Lopez, Leila Tajedin, Huijong Han, Inari Kursula
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-06-01
Series:PLoS Biology
Online Access:https://doi.org/10.1371/journal.pbio.3000315
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spelling doaj-7cab1c7c7a6844b7973e4fcc26cd64cf2021-07-02T16:29:11ZengPublic Library of Science (PLoS)PLoS Biology1544-91731545-78852019-06-01176e300031510.1371/journal.pbio.3000315Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation.Esa-Pekka KumpulaAndrea J LopezLeila TajedinHuijong HanInari KursulaPlasmodium actins form very short filaments and have a noncanonical link between ATP hydrolysis and polymerization. Long filaments are detrimental to the parasites, but the structural factors constraining Plasmodium microfilament lengths have remained unknown. Using high-resolution crystallography, we show that magnesium binding causes a slight flattening of the Plasmodium actin I monomer, and subsequent phosphate release results in a more twisted conformation. Thus, the Mg-bound monomer is closer in conformation to filamentous (F) actin than the Ca form, and this likely facilitates polymerization. A coordinated potassium ion resides in the active site during hydrolysis and leaves together with the phosphate, a process governed by the position of the Arg178/Asp180-containing A loop. Asp180 interacts with either Lys270 or His74, depending on the protonation state of the histidine, while Arg178 links the inner and outer domains (ID and OD) of the actin protomer. Hence, the A loop acts as a switch between stable and unstable filament conformations, the latter leading to fragmentation. Our data provide a comprehensive model for polymerization, ATP hydrolysis and phosphate release, and fragmentation of parasite microfilaments. Similar mechanisms may well exist in canonical actins, although fragmentation is much less favorable due to several subtle sequence differences as well as the methylation of His73, which is absent on the corresponding His74 in Plasmodium actin I.https://doi.org/10.1371/journal.pbio.3000315
collection DOAJ
language English
format Article
sources DOAJ
author Esa-Pekka Kumpula
Andrea J Lopez
Leila Tajedin
Huijong Han
Inari Kursula
spellingShingle Esa-Pekka Kumpula
Andrea J Lopez
Leila Tajedin
Huijong Han
Inari Kursula
Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation.
PLoS Biology
author_facet Esa-Pekka Kumpula
Andrea J Lopez
Leila Tajedin
Huijong Han
Inari Kursula
author_sort Esa-Pekka Kumpula
title Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation.
title_short Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation.
title_full Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation.
title_fullStr Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation.
title_full_unstemmed Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation.
title_sort atomic view into plasmodium actin polymerization, atp hydrolysis, and fragmentation.
publisher Public Library of Science (PLoS)
series PLoS Biology
issn 1544-9173
1545-7885
publishDate 2019-06-01
description Plasmodium actins form very short filaments and have a noncanonical link between ATP hydrolysis and polymerization. Long filaments are detrimental to the parasites, but the structural factors constraining Plasmodium microfilament lengths have remained unknown. Using high-resolution crystallography, we show that magnesium binding causes a slight flattening of the Plasmodium actin I monomer, and subsequent phosphate release results in a more twisted conformation. Thus, the Mg-bound monomer is closer in conformation to filamentous (F) actin than the Ca form, and this likely facilitates polymerization. A coordinated potassium ion resides in the active site during hydrolysis and leaves together with the phosphate, a process governed by the position of the Arg178/Asp180-containing A loop. Asp180 interacts with either Lys270 or His74, depending on the protonation state of the histidine, while Arg178 links the inner and outer domains (ID and OD) of the actin protomer. Hence, the A loop acts as a switch between stable and unstable filament conformations, the latter leading to fragmentation. Our data provide a comprehensive model for polymerization, ATP hydrolysis and phosphate release, and fragmentation of parasite microfilaments. Similar mechanisms may well exist in canonical actins, although fragmentation is much less favorable due to several subtle sequence differences as well as the methylation of His73, which is absent on the corresponding His74 in Plasmodium actin I.
url https://doi.org/10.1371/journal.pbio.3000315
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