Proteome and allergenome of the European house dust mite Dermatophagoides pteronyssinus.

The European house dust mite Dermatophagoides pteronyssinus is of significant medical importance as it is a major elicitor of allergic illnesses. In this analysis we have undertaken comprehensive bioinformatic and proteomic examination of Dermatophagoides pteronyssinus airmid, identified 12,530 pred...

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Main Authors: Rose Waldron, Jamie McGowan, Natasha Gordon, Charley McCarthy, E Bruce Mitchell, David A Fitzpatrick
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0216171
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spelling doaj-7d09df83455e401d930dc399a42f3d042021-03-03T20:42:20ZengPublic Library of Science (PLoS)PLoS ONE1932-62032019-01-01145e021617110.1371/journal.pone.0216171Proteome and allergenome of the European house dust mite Dermatophagoides pteronyssinus.Rose WaldronJamie McGowanNatasha GordonCharley McCarthyE Bruce MitchellDavid A FitzpatrickThe European house dust mite Dermatophagoides pteronyssinus is of significant medical importance as it is a major elicitor of allergic illnesses. In this analysis we have undertaken comprehensive bioinformatic and proteomic examination of Dermatophagoides pteronyssinus airmid, identified 12,530 predicted proteins and validated the expression of 4,002 proteins. Examination of homology between predicted proteins and allergens from other species revealed as much as 2.6% of the D. pteronyssinus airmid proteins may cause an allergenic response. Many of the potential allergens have evidence for expression (n = 259) and excretion (n = 161) making them interesting targets for future allergen studies. Comparative proteomic analysis of mite body and spent growth medium facilitated qualitative assessment of mite group allergen localisation. Protein extracts from house dust contain a substantial number of uncharacterised D. pteronyssinus proteins in addition to known and putative allergens. Novel D. pteronyssinus proteins were identified to be highly abundant both in house dust and laboratory cultures and included numerous carbohydrate active enzymes that may be involved in cuticle remodelling, bacteriophagy or mycophagy. These data may have clinical applications in the development of allergen-specific immunotherapy that mimic natural exposure. Using a phylogenomic approach utilising a supermatrix and supertree methodologies we also show that D. pteronyssinus is more closely related to Euroglyphus maynei than Dermatophagoides farinae.https://doi.org/10.1371/journal.pone.0216171
collection DOAJ
language English
format Article
sources DOAJ
author Rose Waldron
Jamie McGowan
Natasha Gordon
Charley McCarthy
E Bruce Mitchell
David A Fitzpatrick
spellingShingle Rose Waldron
Jamie McGowan
Natasha Gordon
Charley McCarthy
E Bruce Mitchell
David A Fitzpatrick
Proteome and allergenome of the European house dust mite Dermatophagoides pteronyssinus.
PLoS ONE
author_facet Rose Waldron
Jamie McGowan
Natasha Gordon
Charley McCarthy
E Bruce Mitchell
David A Fitzpatrick
author_sort Rose Waldron
title Proteome and allergenome of the European house dust mite Dermatophagoides pteronyssinus.
title_short Proteome and allergenome of the European house dust mite Dermatophagoides pteronyssinus.
title_full Proteome and allergenome of the European house dust mite Dermatophagoides pteronyssinus.
title_fullStr Proteome and allergenome of the European house dust mite Dermatophagoides pteronyssinus.
title_full_unstemmed Proteome and allergenome of the European house dust mite Dermatophagoides pteronyssinus.
title_sort proteome and allergenome of the european house dust mite dermatophagoides pteronyssinus.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2019-01-01
description The European house dust mite Dermatophagoides pteronyssinus is of significant medical importance as it is a major elicitor of allergic illnesses. In this analysis we have undertaken comprehensive bioinformatic and proteomic examination of Dermatophagoides pteronyssinus airmid, identified 12,530 predicted proteins and validated the expression of 4,002 proteins. Examination of homology between predicted proteins and allergens from other species revealed as much as 2.6% of the D. pteronyssinus airmid proteins may cause an allergenic response. Many of the potential allergens have evidence for expression (n = 259) and excretion (n = 161) making them interesting targets for future allergen studies. Comparative proteomic analysis of mite body and spent growth medium facilitated qualitative assessment of mite group allergen localisation. Protein extracts from house dust contain a substantial number of uncharacterised D. pteronyssinus proteins in addition to known and putative allergens. Novel D. pteronyssinus proteins were identified to be highly abundant both in house dust and laboratory cultures and included numerous carbohydrate active enzymes that may be involved in cuticle remodelling, bacteriophagy or mycophagy. These data may have clinical applications in the development of allergen-specific immunotherapy that mimic natural exposure. Using a phylogenomic approach utilising a supermatrix and supertree methodologies we also show that D. pteronyssinus is more closely related to Euroglyphus maynei than Dermatophagoides farinae.
url https://doi.org/10.1371/journal.pone.0216171
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