Characterization of 10 New Nuclear Microsatellite Markers in <i>Acca sellowiana</i> (Myrtaceae)

Premise of the study: Microsatellite primers were identified and characterized in <i>Acca sellowiana</i> in order to expand the limited number of pre-existing polymorphic markers for use in population genetic studies for conservation, phylogeography, breeding, and domestication. Methods...

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Main Authors: Gustavo H. F. Klabunde, Denise Olkoski, Vinicius Vilperte, Maria I. Zucchi, Rubens O. Nodari
Format: Article
Language:English
Published: Wiley 2014-06-01
Series:Applications in Plant Sciences
Subjects:
Online Access:http://www.bioone.org/doi/full/10.3732/apps.1400020
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spelling doaj-7d0b07ae45a94c4f9b69400d848994962020-11-25T00:32:13ZengWileyApplications in Plant Sciences2168-04502014-06-0126140002010.3732/apps.1400020Characterization of 10 New Nuclear Microsatellite Markers in <i>Acca sellowiana</i> (Myrtaceae)Gustavo H. F. Klabunde0Denise Olkoski1Vinicius Vilperte2Maria I. Zucchi3Rubens O. Nodari4Post Graduation Program in Plant Genetic Resources, Universidade Federal de Santa Catarina, CP 476 88034-000 Florian&#243;polis, BrazilPost Graduation Program in Plant Genetic Resources, Universidade Federal de Santa Catarina, CP 476 88034-000 Florian&#243;polis, BrazilPost Graduation Program in Plant Genetic Resources, Universidade Federal de Santa Catarina, CP 476 88034-000 Florian&#243;polis, BrazilPolo Centro Sul, Ag&#234;ncia Paulista de Tecnologia dos Agroneg&#243;cios, CP 13400 970 Piracicaba, BrazilPost Graduation Program in Plant Genetic Resources, Universidade Federal de Santa Catarina, CP 476 88034-000 Florian&#243;polis, BrazilPremise of the study: Microsatellite primers were identified and characterized in <i>Acca sellowiana</i> in order to expand the limited number of pre-existing polymorphic markers for use in population genetic studies for conservation, phylogeography, breeding, and domestication. Methods and Results: A total of 10 polymorphic microsatellite primers were designed from clones obtained from a simple sequence repeat (SSR)&#8211;enriched genomic library. The primers amplified di- and trinucleotide repeats with four to 27 alleles per locus. In all tested populations, the observed heterozygosity ranged from 0.269 to 1.0. Conclusions: These new polymorphic SSR markers will allow future genetic studies to be denser, either for genetic structure characterization of natural populations or for studies involving genetic breeding and domestication process in <i>A. sellowiana</i>.http://www.bioone.org/doi/full/10.3732/apps.1400020Acca sellowianafeijoaPlinia caulifloraPlinia jaboticabaPlinia trunciflorapopulation genetics
collection DOAJ
language English
format Article
sources DOAJ
author Gustavo H. F. Klabunde
Denise Olkoski
Vinicius Vilperte
Maria I. Zucchi
Rubens O. Nodari
spellingShingle Gustavo H. F. Klabunde
Denise Olkoski
Vinicius Vilperte
Maria I. Zucchi
Rubens O. Nodari
Characterization of 10 New Nuclear Microsatellite Markers in <i>Acca sellowiana</i> (Myrtaceae)
Applications in Plant Sciences
Acca sellowiana
feijoa
Plinia cauliflora
Plinia jaboticaba
Plinia trunciflora
population genetics
author_facet Gustavo H. F. Klabunde
Denise Olkoski
Vinicius Vilperte
Maria I. Zucchi
Rubens O. Nodari
author_sort Gustavo H. F. Klabunde
title Characterization of 10 New Nuclear Microsatellite Markers in <i>Acca sellowiana</i> (Myrtaceae)
title_short Characterization of 10 New Nuclear Microsatellite Markers in <i>Acca sellowiana</i> (Myrtaceae)
title_full Characterization of 10 New Nuclear Microsatellite Markers in <i>Acca sellowiana</i> (Myrtaceae)
title_fullStr Characterization of 10 New Nuclear Microsatellite Markers in <i>Acca sellowiana</i> (Myrtaceae)
title_full_unstemmed Characterization of 10 New Nuclear Microsatellite Markers in <i>Acca sellowiana</i> (Myrtaceae)
title_sort characterization of 10 new nuclear microsatellite markers in <i>acca sellowiana</i> (myrtaceae)
publisher Wiley
series Applications in Plant Sciences
issn 2168-0450
publishDate 2014-06-01
description Premise of the study: Microsatellite primers were identified and characterized in <i>Acca sellowiana</i> in order to expand the limited number of pre-existing polymorphic markers for use in population genetic studies for conservation, phylogeography, breeding, and domestication. Methods and Results: A total of 10 polymorphic microsatellite primers were designed from clones obtained from a simple sequence repeat (SSR)&#8211;enriched genomic library. The primers amplified di- and trinucleotide repeats with four to 27 alleles per locus. In all tested populations, the observed heterozygosity ranged from 0.269 to 1.0. Conclusions: These new polymorphic SSR markers will allow future genetic studies to be denser, either for genetic structure characterization of natural populations or for studies involving genetic breeding and domestication process in <i>A. sellowiana</i>.
topic Acca sellowiana
feijoa
Plinia cauliflora
Plinia jaboticaba
Plinia trunciflora
population genetics
url http://www.bioone.org/doi/full/10.3732/apps.1400020
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