A Compensatory U1snRNA Partially Rescues FAH Splicing and Protein Expression in a Splicing-Defective Mouse Model of Tyrosinemia Type I

The elucidation of aberrant splicing mechanisms, frequently associated with disease has led to the development of RNA therapeutics based on the U1snRNA, which is involved in 5′ splice site (5′ss) recognition. Studies in cellular models have demonstrated that engineered U1snRNAs c...

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Main Authors: Dario Balestra, Daniela Scalet, Mattia Ferrarese, Silvia Lombardi, Nicole Ziliotto, Chrystal C. Croes, Naomi Petersen, Piter Bosma, Federico Riccardi, Franco Pagani, Mirko Pinotti, Stan F. J. van de Graaf
Format: Article
Language:English
Published: MDPI AG 2020-03-01
Series:International Journal of Molecular Sciences
Subjects:
fah
Online Access:https://www.mdpi.com/1422-0067/21/6/2136
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spelling doaj-7d2b03228a504040b8b832911c05fb852020-11-25T03:10:06ZengMDPI AGInternational Journal of Molecular Sciences1422-00672020-03-01216213610.3390/ijms21062136ijms21062136A Compensatory U1snRNA Partially Rescues FAH Splicing and Protein Expression in a Splicing-Defective Mouse Model of Tyrosinemia Type IDario Balestra0Daniela Scalet1Mattia Ferrarese2Silvia Lombardi3Nicole Ziliotto4Chrystal C. Croes5Naomi Petersen6Piter Bosma7Federico Riccardi8Franco Pagani9Mirko Pinotti10Stan F. J. van de Graaf11Department of Life Sciences and Biotechnology, University of Ferrara, 44121 Ferrara, ItalyDepartment of Life Sciences and Biotechnology, University of Ferrara, 44121 Ferrara, ItalyDepartment of Life Sciences and Biotechnology, University of Ferrara, 44121 Ferrara, ItalyDepartment of Life Sciences and Biotechnology, University of Ferrara, 44121 Ferrara, ItalyDepartment of Life Sciences and Biotechnology, University of Ferrara, 44121 Ferrara, ItalyTytgat Institute for Liver and Intestinal Research, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The NetherlandsTytgat Institute for Liver and Intestinal Research, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The NetherlandsTytgat Institute for Liver and Intestinal Research, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The NetherlandsHuman Molecular Genetics, International Centre for Genetic Engineering and Biotechnology, 34149 Trieste, ItalyHuman Molecular Genetics, International Centre for Genetic Engineering and Biotechnology, 34149 Trieste, ItalyDepartment of Life Sciences and Biotechnology, University of Ferrara, 44121 Ferrara, ItalyTytgat Institute for Liver and Intestinal Research, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The NetherlandsThe elucidation of aberrant splicing mechanisms, frequently associated with disease has led to the development of RNA therapeutics based on the U1snRNA, which is involved in 5&#8242; splice site (5&#8242;ss) recognition. Studies in cellular models have demonstrated that engineered U1snRNAs can rescue different splicing mutation types. However, the assessment of their correction potential in vivo is limited by the scarcity of animal models with the targetable splicing defects. Here, we challenged the U1snRNA in the <i>FAH5961SB</i> mouse model of hepatic fumarylacetoacetate hydrolase (FAH) deficiency (Hereditary Tyrosinemia type I, HT1) due to the <i>FAH</i> c.706G&gt;A splicing mutation. Through minigene expression studies we selected a compensatory U1snRNA (U1<sup>F</sup>) that was able to rescue this mutation. Intriguingly, adeno-associated virus-mediated delivery of U1<sup>F</sup> (AAV8-U1<sup>F</sup>), but not of U1<sup>wt</sup>, partially rescued FAH splicing in mouse hepatocytes. Consistently, FAH protein was detectable only in the liver of AAV8-U1<sup>F</sup> treated mice, which displayed a slightly prolonged survival. Moreover, RNA sequencing revealed the negligible impact of the U1<sup>F</sup> on the splicing profile and overall gene expression, thus pointing toward gene specificity. These data provide early in vivo proof-of-principle of the correction potential of compensatory U1snRNAs in HTI and encourage further optimization on a therapeutic perspective, and translation to other splicing-defective forms of metabolic diseases.https://www.mdpi.com/1422-0067/21/6/2136fahfumarylacetoacetate hydrolase deficiencytyrosinemia type iaberrant splicingmouse modelsu1snrnarna therapeutics
collection DOAJ
language English
format Article
sources DOAJ
author Dario Balestra
Daniela Scalet
Mattia Ferrarese
Silvia Lombardi
Nicole Ziliotto
Chrystal C. Croes
Naomi Petersen
Piter Bosma
Federico Riccardi
Franco Pagani
Mirko Pinotti
Stan F. J. van de Graaf
spellingShingle Dario Balestra
Daniela Scalet
Mattia Ferrarese
Silvia Lombardi
Nicole Ziliotto
Chrystal C. Croes
Naomi Petersen
Piter Bosma
Federico Riccardi
Franco Pagani
Mirko Pinotti
Stan F. J. van de Graaf
A Compensatory U1snRNA Partially Rescues FAH Splicing and Protein Expression in a Splicing-Defective Mouse Model of Tyrosinemia Type I
International Journal of Molecular Sciences
fah
fumarylacetoacetate hydrolase deficiency
tyrosinemia type i
aberrant splicing
mouse models
u1snrna
rna therapeutics
author_facet Dario Balestra
Daniela Scalet
Mattia Ferrarese
Silvia Lombardi
Nicole Ziliotto
Chrystal C. Croes
Naomi Petersen
Piter Bosma
Federico Riccardi
Franco Pagani
Mirko Pinotti
Stan F. J. van de Graaf
author_sort Dario Balestra
title A Compensatory U1snRNA Partially Rescues FAH Splicing and Protein Expression in a Splicing-Defective Mouse Model of Tyrosinemia Type I
title_short A Compensatory U1snRNA Partially Rescues FAH Splicing and Protein Expression in a Splicing-Defective Mouse Model of Tyrosinemia Type I
title_full A Compensatory U1snRNA Partially Rescues FAH Splicing and Protein Expression in a Splicing-Defective Mouse Model of Tyrosinemia Type I
title_fullStr A Compensatory U1snRNA Partially Rescues FAH Splicing and Protein Expression in a Splicing-Defective Mouse Model of Tyrosinemia Type I
title_full_unstemmed A Compensatory U1snRNA Partially Rescues FAH Splicing and Protein Expression in a Splicing-Defective Mouse Model of Tyrosinemia Type I
title_sort compensatory u1snrna partially rescues fah splicing and protein expression in a splicing-defective mouse model of tyrosinemia type i
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2020-03-01
description The elucidation of aberrant splicing mechanisms, frequently associated with disease has led to the development of RNA therapeutics based on the U1snRNA, which is involved in 5&#8242; splice site (5&#8242;ss) recognition. Studies in cellular models have demonstrated that engineered U1snRNAs can rescue different splicing mutation types. However, the assessment of their correction potential in vivo is limited by the scarcity of animal models with the targetable splicing defects. Here, we challenged the U1snRNA in the <i>FAH5961SB</i> mouse model of hepatic fumarylacetoacetate hydrolase (FAH) deficiency (Hereditary Tyrosinemia type I, HT1) due to the <i>FAH</i> c.706G&gt;A splicing mutation. Through minigene expression studies we selected a compensatory U1snRNA (U1<sup>F</sup>) that was able to rescue this mutation. Intriguingly, adeno-associated virus-mediated delivery of U1<sup>F</sup> (AAV8-U1<sup>F</sup>), but not of U1<sup>wt</sup>, partially rescued FAH splicing in mouse hepatocytes. Consistently, FAH protein was detectable only in the liver of AAV8-U1<sup>F</sup> treated mice, which displayed a slightly prolonged survival. Moreover, RNA sequencing revealed the negligible impact of the U1<sup>F</sup> on the splicing profile and overall gene expression, thus pointing toward gene specificity. These data provide early in vivo proof-of-principle of the correction potential of compensatory U1snRNAs in HTI and encourage further optimization on a therapeutic perspective, and translation to other splicing-defective forms of metabolic diseases.
topic fah
fumarylacetoacetate hydrolase deficiency
tyrosinemia type i
aberrant splicing
mouse models
u1snrna
rna therapeutics
url https://www.mdpi.com/1422-0067/21/6/2136
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