Effects of Cardiolipin on the Conformational Dynamics of Membrane-Anchored Bcl-xL

The anti-apoptotic protein Bcl-xL regulates apoptosis by preventing the permeation of the mitochondrial outer membrane by pro-apoptotic pore-forming proteins, which release apoptotic factors into the cytosol that ultimately lead to cell death. Two different membrane-integrated Bcl-xL constructs have...

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Main Authors: Vivek Tyagi, Victor Vasquez-Montes, J. Alfredo Freites, Alexander Kyrychenko, Douglas J. Tobias, Alexey S. Ladokhin
Format: Article
Language:English
Published: MDPI AG 2021-08-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/22/17/9388
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spelling doaj-7e4a674630de4e418b35ae6cebd4c4f72021-09-09T13:47:50ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672021-08-01229388938810.3390/ijms22179388Effects of Cardiolipin on the Conformational Dynamics of Membrane-Anchored Bcl-xLVivek Tyagi0Victor Vasquez-Montes1J. Alfredo Freites2Alexander Kyrychenko3Douglas J. Tobias4Alexey S. Ladokhin5Department of Materials Science and Engineering, University of California, Irvine, CA 92697, USADepartment of Biochemistry and Molecular Biology, The University of Kansas Medical Center, Kansas City, KS 66160, USADepartment of Chemistry, University of California, Irvine, CA 92697, USADepartment of Biochemistry and Molecular Biology, The University of Kansas Medical Center, Kansas City, KS 66160, USADepartment of Chemistry, University of California, Irvine, CA 92697, USADepartment of Biochemistry and Molecular Biology, The University of Kansas Medical Center, Kansas City, KS 66160, USAThe anti-apoptotic protein Bcl-xL regulates apoptosis by preventing the permeation of the mitochondrial outer membrane by pro-apoptotic pore-forming proteins, which release apoptotic factors into the cytosol that ultimately lead to cell death. Two different membrane-integrated Bcl-xL constructs have been identified: a membrane-anchored and a membrane-inserted conformation. Here, we use molecular dynamics simulations to study the effect of the mitochondrial specific lipid cardiolipin and the protein protonation state on the conformational dynamics of membrane-anchored Bcl-xL. The analysis reveals that the protonation state of the protein and cardiolipin content of the membrane modulate the orientation of the soluble head region (helices α1 through α7) and hence the exposure of its BH3-binding groove, which is required for its interaction with pro-apoptotic proteins.https://www.mdpi.com/1422-0067/22/17/9388Bcl-xLBCL-2 proteinsBH3-binding sitecardiolipinapoptotic regulationprotein–membrane interactions
collection DOAJ
language English
format Article
sources DOAJ
author Vivek Tyagi
Victor Vasquez-Montes
J. Alfredo Freites
Alexander Kyrychenko
Douglas J. Tobias
Alexey S. Ladokhin
spellingShingle Vivek Tyagi
Victor Vasquez-Montes
J. Alfredo Freites
Alexander Kyrychenko
Douglas J. Tobias
Alexey S. Ladokhin
Effects of Cardiolipin on the Conformational Dynamics of Membrane-Anchored Bcl-xL
International Journal of Molecular Sciences
Bcl-xL
BCL-2 proteins
BH3-binding site
cardiolipin
apoptotic regulation
protein–membrane interactions
author_facet Vivek Tyagi
Victor Vasquez-Montes
J. Alfredo Freites
Alexander Kyrychenko
Douglas J. Tobias
Alexey S. Ladokhin
author_sort Vivek Tyagi
title Effects of Cardiolipin on the Conformational Dynamics of Membrane-Anchored Bcl-xL
title_short Effects of Cardiolipin on the Conformational Dynamics of Membrane-Anchored Bcl-xL
title_full Effects of Cardiolipin on the Conformational Dynamics of Membrane-Anchored Bcl-xL
title_fullStr Effects of Cardiolipin on the Conformational Dynamics of Membrane-Anchored Bcl-xL
title_full_unstemmed Effects of Cardiolipin on the Conformational Dynamics of Membrane-Anchored Bcl-xL
title_sort effects of cardiolipin on the conformational dynamics of membrane-anchored bcl-xl
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1661-6596
1422-0067
publishDate 2021-08-01
description The anti-apoptotic protein Bcl-xL regulates apoptosis by preventing the permeation of the mitochondrial outer membrane by pro-apoptotic pore-forming proteins, which release apoptotic factors into the cytosol that ultimately lead to cell death. Two different membrane-integrated Bcl-xL constructs have been identified: a membrane-anchored and a membrane-inserted conformation. Here, we use molecular dynamics simulations to study the effect of the mitochondrial specific lipid cardiolipin and the protein protonation state on the conformational dynamics of membrane-anchored Bcl-xL. The analysis reveals that the protonation state of the protein and cardiolipin content of the membrane modulate the orientation of the soluble head region (helices α1 through α7) and hence the exposure of its BH3-binding groove, which is required for its interaction with pro-apoptotic proteins.
topic Bcl-xL
BCL-2 proteins
BH3-binding site
cardiolipin
apoptotic regulation
protein–membrane interactions
url https://www.mdpi.com/1422-0067/22/17/9388
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