Application of ubiquitin SSCP analysis in taxonomic studies within the subgenus Orinocarabus (Coleoptera: Carabidae: Carabus)

SSCP (single-strand conformation polymorphism) analyses of ubiquitin genes were used to investigate evolutionary relationships within the subgenus Orinocarabus of the genus Carabus. After SSCP electrophoresis of PCR-amplified ubiquitin copies, population-specific band patterns were obtained. Ubiquit...

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Main Authors: Dieter SEDLMAIR, Roland GERSTMEIER, Ralf EINSPANIER
Format: Article
Language:English
Published: Institute of Entomology, Biology Centre, Czech Academy of Science 2000-10-01
Series:European Journal of Entomology
Subjects:
dna
Online Access:https://www.eje.cz/artkey/eje-200003-0014_Application_of_ubiquitin_SSCP_analysis_in_taxonomic_studies_within_the_subgenus_Orinocarabus_Coleoptera_Carab.php
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spelling doaj-7eedad4028d146bc951805deadb1bf8b2021-04-16T20:32:43ZengInstitute of Entomology, Biology Centre, Czech Academy of ScienceEuropean Journal of Entomology1210-57591802-88292000-10-0197338739410.14411/eje.2000.059eje-200003-0014Application of ubiquitin SSCP analysis in taxonomic studies within the subgenus Orinocarabus (Coleoptera: Carabidae: Carabus)Dieter SEDLMAIR0Roland GERSTMEIER1Ralf EINSPANIER2Institute of Applied Zoology, Technical University of Munich, D-85350 Freising, Germany; e-mail: d.sedlmair@lrz.tum.deInstitute of Applied Zoology, Technical University of Munich, D-85350 Freising, Germany; e-mail: d.sedlmair@lrz.tum.deInstitute of Physiology, Technical University of Munich, D-85350 Freising, GermanySSCP (single-strand conformation polymorphism) analyses of ubiquitin genes were used to investigate evolutionary relationships within the subgenus Orinocarabus of the genus Carabus. After SSCP electrophoresis of PCR-amplified ubiquitin copies, population-specific band patterns were obtained. Ubiquitin-SSCP-analyses of the six central European Orinocarabus species, including three subspecies and thirteen populations, resulted in a dendrogram that differed from that based on morphology. Phylogenetic analysis of mitochondrial DNA (mtDNA) did not support the SSCP dendrogram, but was in good accordance with the taxonomy based on morphological characters. The reason for the discrepancies seems to be evolutionary conservation of the ubiquitin genes. The time that elapsed since the evolution of the closely related Orinocarabus species is too short for concerted evolution of the ubiquitin genes.https://www.eje.cz/artkey/eje-200003-0014_Application_of_ubiquitin_SSCP_analysis_in_taxonomic_studies_within_the_subgenus_Orinocarabus_Coleoptera_Carab.phpcarabidaecarabusorinocarabustaxonomyubiquitinsscpdna
collection DOAJ
language English
format Article
sources DOAJ
author Dieter SEDLMAIR
Roland GERSTMEIER
Ralf EINSPANIER
spellingShingle Dieter SEDLMAIR
Roland GERSTMEIER
Ralf EINSPANIER
Application of ubiquitin SSCP analysis in taxonomic studies within the subgenus Orinocarabus (Coleoptera: Carabidae: Carabus)
European Journal of Entomology
carabidae
carabus
orinocarabus
taxonomy
ubiquitin
sscp
dna
author_facet Dieter SEDLMAIR
Roland GERSTMEIER
Ralf EINSPANIER
author_sort Dieter SEDLMAIR
title Application of ubiquitin SSCP analysis in taxonomic studies within the subgenus Orinocarabus (Coleoptera: Carabidae: Carabus)
title_short Application of ubiquitin SSCP analysis in taxonomic studies within the subgenus Orinocarabus (Coleoptera: Carabidae: Carabus)
title_full Application of ubiquitin SSCP analysis in taxonomic studies within the subgenus Orinocarabus (Coleoptera: Carabidae: Carabus)
title_fullStr Application of ubiquitin SSCP analysis in taxonomic studies within the subgenus Orinocarabus (Coleoptera: Carabidae: Carabus)
title_full_unstemmed Application of ubiquitin SSCP analysis in taxonomic studies within the subgenus Orinocarabus (Coleoptera: Carabidae: Carabus)
title_sort application of ubiquitin sscp analysis in taxonomic studies within the subgenus orinocarabus (coleoptera: carabidae: carabus)
publisher Institute of Entomology, Biology Centre, Czech Academy of Science
series European Journal of Entomology
issn 1210-5759
1802-8829
publishDate 2000-10-01
description SSCP (single-strand conformation polymorphism) analyses of ubiquitin genes were used to investigate evolutionary relationships within the subgenus Orinocarabus of the genus Carabus. After SSCP electrophoresis of PCR-amplified ubiquitin copies, population-specific band patterns were obtained. Ubiquitin-SSCP-analyses of the six central European Orinocarabus species, including three subspecies and thirteen populations, resulted in a dendrogram that differed from that based on morphology. Phylogenetic analysis of mitochondrial DNA (mtDNA) did not support the SSCP dendrogram, but was in good accordance with the taxonomy based on morphological characters. The reason for the discrepancies seems to be evolutionary conservation of the ubiquitin genes. The time that elapsed since the evolution of the closely related Orinocarabus species is too short for concerted evolution of the ubiquitin genes.
topic carabidae
carabus
orinocarabus
taxonomy
ubiquitin
sscp
dna
url https://www.eje.cz/artkey/eje-200003-0014_Application_of_ubiquitin_SSCP_analysis_in_taxonomic_studies_within_the_subgenus_Orinocarabus_Coleoptera_Carab.php
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