MOXD2, a Gene Possibly Associated with Olfaction, Is Frequently Inactivated in Birds.

Vertebrate MOXD2 encodes a monooxygenase DBH-like 2 protein that could be involved in neurotransmitter metabolism, potentially during olfactory transduction. Loss of MOXD2 in apes and whales has been proposed to be associated with evolution of olfaction in these clades. We analyzed 57 bird genomes t...

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Main Authors: Chul Jun Goh, Dongjin Choi, Dong-Bin Park, Hyein Kim, Yoonsoo Hahn
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2016-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC4830563?pdf=render
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spelling doaj-801aed4ed6cd486f8741d9dbcba9ae9f2020-11-24T21:33:07ZengPublic Library of Science (PLoS)PLoS ONE1932-62032016-01-01114e015243110.1371/journal.pone.0152431MOXD2, a Gene Possibly Associated with Olfaction, Is Frequently Inactivated in Birds.Chul Jun GohDongjin ChoiDong-Bin ParkHyein KimYoonsoo HahnVertebrate MOXD2 encodes a monooxygenase DBH-like 2 protein that could be involved in neurotransmitter metabolism, potentially during olfactory transduction. Loss of MOXD2 in apes and whales has been proposed to be associated with evolution of olfaction in these clades. We analyzed 57 bird genomes to identify MOXD2 sequences and found frequent loss of MOXD2 in 38 birds. Among the 57 birds, 19 species appeared to have an intact MOXD2 that encoded a full-length protein; 32 birds had a gene with open reading frame-disrupting point mutations and/or exon deletions; and the remaining 6 species did not show any MOXD2 sequence, suggesting a whole-gene deletion. Notably, among 10 passerine birds examined, 9 species shared a common genomic deletion that spanned several exons, implying the gene loss occurred in a common ancestor of these birds. However, 2 closely related penguin species, each of which had an inactive MOXD2, did not share any mutation, suggesting an independent loss after their divergence. Distribution of the 38 birds without an intact MOXD2 in the bird phylogenetic tree clearly indicates that MOXD2 loss is widespread and independent in bird lineages. We propose that widespread MOXD2 loss in some bird lineages may be implicated in the evolution of olfactory perception in these birds.http://europepmc.org/articles/PMC4830563?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Chul Jun Goh
Dongjin Choi
Dong-Bin Park
Hyein Kim
Yoonsoo Hahn
spellingShingle Chul Jun Goh
Dongjin Choi
Dong-Bin Park
Hyein Kim
Yoonsoo Hahn
MOXD2, a Gene Possibly Associated with Olfaction, Is Frequently Inactivated in Birds.
PLoS ONE
author_facet Chul Jun Goh
Dongjin Choi
Dong-Bin Park
Hyein Kim
Yoonsoo Hahn
author_sort Chul Jun Goh
title MOXD2, a Gene Possibly Associated with Olfaction, Is Frequently Inactivated in Birds.
title_short MOXD2, a Gene Possibly Associated with Olfaction, Is Frequently Inactivated in Birds.
title_full MOXD2, a Gene Possibly Associated with Olfaction, Is Frequently Inactivated in Birds.
title_fullStr MOXD2, a Gene Possibly Associated with Olfaction, Is Frequently Inactivated in Birds.
title_full_unstemmed MOXD2, a Gene Possibly Associated with Olfaction, Is Frequently Inactivated in Birds.
title_sort moxd2, a gene possibly associated with olfaction, is frequently inactivated in birds.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2016-01-01
description Vertebrate MOXD2 encodes a monooxygenase DBH-like 2 protein that could be involved in neurotransmitter metabolism, potentially during olfactory transduction. Loss of MOXD2 in apes and whales has been proposed to be associated with evolution of olfaction in these clades. We analyzed 57 bird genomes to identify MOXD2 sequences and found frequent loss of MOXD2 in 38 birds. Among the 57 birds, 19 species appeared to have an intact MOXD2 that encoded a full-length protein; 32 birds had a gene with open reading frame-disrupting point mutations and/or exon deletions; and the remaining 6 species did not show any MOXD2 sequence, suggesting a whole-gene deletion. Notably, among 10 passerine birds examined, 9 species shared a common genomic deletion that spanned several exons, implying the gene loss occurred in a common ancestor of these birds. However, 2 closely related penguin species, each of which had an inactive MOXD2, did not share any mutation, suggesting an independent loss after their divergence. Distribution of the 38 birds without an intact MOXD2 in the bird phylogenetic tree clearly indicates that MOXD2 loss is widespread and independent in bird lineages. We propose that widespread MOXD2 loss in some bird lineages may be implicated in the evolution of olfactory perception in these birds.
url http://europepmc.org/articles/PMC4830563?pdf=render
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