Co-Transcriptional RNA Processing in Plants: Exploring from the Perspective of Polyadenylation

Co-Transcriptional RNA Processing in Plants: Exploring from the Perspective of Polyadenylation

Most protein-coding genes in eukaryotes possess at least two poly(A) sites, and alternative polyadenylation is considered a contributing factor to transcriptomic and proteomic diversity. Following transcription, a nascent RNA usually undergoes capping, splicing, cleavage, and polyadenylation, result...

Full description

Bibliographic Details
Main Authors:	Jing Yang, Ying Cao, Ligeng Ma
Format:	Article
Language:	English
Published:	MDPI AG 2021-03-01
Series:	International Journal of Molecular Sciences
Subjects:	polyadenylation RNA processing transcription coupling regulation liquid–liquid phase separation (LLPS) gene expression
Online Access:	https://www.mdpi.com/1422-0067/22/7/3300

Similar Items

The transcriptional elongation rate regulates alternative polyadenylation in yeast
by: Joseph V Geisberg, et al.
Published: (2020-08-01)

The Significance of the Intrinsically Disordered Regions for the Functions of the bHLH Transcription Factors
by: Aneta Tarczewska, et al.
Published: (2019-10-01)

RNA and liquid-liquid phase separation
by: Qi Guo, et al.
Published: (2021-06-01)

Divide and Rule: Phase Separation in Eukaryotic Genome Functioning
by: Sergey V. Razin, et al.
Published: (2020-11-01)

New Perspectives on the Biogenesis of Viral Inclusion Bodies in Negative-Sense RNA Virus Infections
by: Olga Dolnik, et al.
Published: (2021-06-01)

Plant polyadenylation factors: conservation and variety in the polyadenylation complex in plants
by: Hunt Arthur G, et al.
Published: (2012-11-01)

Alternative polyadenylation of mRNA and its role in cancer
by: Fuwen Yuan, et al.
Published: (2021-01-01)

The Participation of the Intrinsically Disordered Regions of the bHLH-PAS Transcription Factors in Disease Development
by: Marta Kolonko-Adamska, et al.
Published: (2021-03-01)

Seeing Keratinocyte Proteins through the Looking Glass of Intrinsic Disorder
by: Rambon Shamilov, et al.
Published: (2021-07-01)

A novel, precipitated polybutylene terephthalate feedstock material for powder bed fusion of polymers (PBF): Material development and initial PBF processability
by: Maximilian A. Dechet, et al.
Published: (2021-01-01)

Multivalent electrostatic pi–cation interaction between synaptophysin and synapsin is responsible for the coacervation
by: Goeun Kim, et al.
Published: (2021-09-01)

Analysis of SINE Families B2, Dip, and Ves with Special Reference to Polyadenylation Signals and Transcription Terminators
by: Nikita S. Vassetzky, et al.
Published: (2021-09-01)

A Thermodynamic Approach for the Prediction of Oiling Out Boundaries from Solubility Data
by: Venkateswarlu Bhamidi, et al.
Published: (2019-09-01)

Molecular Mechanisms of TDP-43 Misfolding and Pathology in Amyotrophic Lateral Sclerosis
by: Archana Prasad, et al.
Published: (2019-02-01)

Exploring the Impact of Cleavage and Polyadenylation Factors on Pre-mRNA Splicing Across Eukaryotes
by: Gildas Lepennetier, et al.
Published: (2017-07-01)

RNA regulatory elements and polyadenylation in plants
by: Arthur G. Hunt
Published: (2012-01-01)

Post-Transcriptional Dysregulation of microRNA and Alternative Polyadenylation in Colorectal Cancer
by: Zhanrui Mao, et al.
Published: (2020-02-01)

Alterations in polyadenylation and its implications for endocrine disease
by: Anders eRehfeld, et al.
Published: (2013-05-01)

A histone modifier, ASXL1, interacts with NONO and is involved in paraspeckle formation in hematopoietic cells
by: Keita Yamamoto, et al.
Published: (2021-08-01)

Cleavage and Polyadenylation Specific Factor 1 Promotes Tumor Progression via Alternative Polyadenylation and Splicing in Hepatocellular Carcinoma
by: Shi-lu Chen, et al.
Published: (2021-03-01)

CPSF30 at the Interface of Alternative Polyadenylation and Cellular Signaling in Plants
by: Manohar Chakrabarti, et al.
Published: (2015-06-01)

Genome-Wide Analysis of Polyadenylation Events in Schmidtea mediterranea
by: Vairavan Lakshmanan, et al.
Published: (2016-10-01)

Effect of CFIm25 knockout on RNA polymerase II transcription
by: Michael Tellier, et al.
Published: (2018-12-01)

XBSeq2: a fast and accurate quantification of differential expression and differential polyadenylation
by: Yuanhang Liu, et al.
Published: (2017-10-01)

Advances in the Bioinformatics Knowledge of mRNA Polyadenylation in Baculovirus Genes
by: Iván Gabriel Peros, et al.
Published: (2020-12-01)

Liquid Biomolecular Condensates and Viral Lifecycles: Review and Perspectives
by: Temitope Akhigbe Etibor, et al.
Published: (2021-02-01)

Cell type-specific termination of transcription by transposable element sequences
by: Conley Andrew B, et al.
Published: (2012-09-01)

TDP-43 Oligomerization and Phase Separation Properties Are Necessary for Autoregulation
by: Ayala, Y.M, et al.
Published: (2022)

QAPA: a new method for the systematic analysis of alternative polyadenylation from RNA-seq data
by: Kevin C. H. Ha, et al.
Published: (2018-03-01)

ALTERNATIVELY POLYADENYLATED CALPASTATIN TRANSCRIPTS IN BOVINE MUSCLES
by: Casale M.F., et al.
Published: (2020-07-01)

Conserved Outer Tegument Component UL11 from Herpes Simplex Virus 1 Is an Intrinsically Disordered, RNA-Binding Protein
by: Claire M. Metrick, et al.
Published: (2020-05-01)

Single-cell alternative polyadenylation analysis delineates GABAergic neuron types
by: Yang Yang, et al.
Published: (2021-07-01)

Dynamic and widespread control of poly(A) tail length during macrophage activation
by: Daly, C.W.P, et al.
Published: (2022)

A Tissue-Specific Landscape of Alternative Polyadenylation, lncRNAs, TFs, and Gene Co-expression Networks in Liriodendron chinense
by: Zhonghua Tu, et al.
Published: (2021-07-01)

Sierra: discovery of differential transcript usage from polyA-captured single-cell RNA-seq data
by: Ralph Patrick, et al.
Published: (2020-07-01)

The Establishment and characterization of a novel plant <i>in vitro</i> cleavage and polyadenylation assay system
by: Zheng, Jun
Published: (2010)

GENOME WIDE ANALYSES OF ALTERNATIVE POLYADENYLATION IN ARABIDOPSIS
by: Guo, Cheng
Published: (2016)

Targeting the Polyadenylation Signal of Pre-mRNA: A New Gene Silencing Approach for Facioscapulohumeral Dystrophy
by: Anne-Charlotte Marsollier, et al.
Published: (2018-05-01)

Emerging Roles of RNA 3′-end Cleavage and Polyadenylation in Pathogenesis, Diagnosis and Therapy of Human Disorders
by: Jamie Nourse, et al.
Published: (2020-06-01)

Putative alternative polyadenylation (APA) events in the early interaction of Salmonella enterica Typhimurium and human host cells
by: Fabian Afonso-Grunz
Published: (2015-12-01)