Metallopeptidases of Toxoplasma gondii: in silico identification and gene expression

Metallopeptidases are a family of proteins with domains that remain highly conserved throughout evolution. These hydrolases require divalent metal cation(s) to activate the water molecule in order to carry out their catalytic action on peptide bonds by nucleophilic attack. Metallopeptidases from par...

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Main Authors: Escotte-Binet Sandie, Huguenin Antoine, Aubert Dominique, Martin Anne-Pascaline, Kaltenbach Matthieu, Florent Isabelle, Villena Isabelle
Format: Article
Language:English
Published: EDP Sciences 2018-01-01
Series:Parasite
Subjects:
Online Access:https://doi.org/10.1051/parasite/2018025
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spelling doaj-8256529ac3fb4f3a88ec69e00da1e37e2021-02-02T08:02:29ZengEDP SciencesParasite1776-10422018-01-01252610.1051/parasite/2018025parasite170113Metallopeptidases of Toxoplasma gondii: in silico identification and gene expressionEscotte-Binet SandieHuguenin AntoineAubert DominiqueMartin Anne-PascalineKaltenbach MatthieuFlorent IsabelleVillena IsabelleMetallopeptidases are a family of proteins with domains that remain highly conserved throughout evolution. These hydrolases require divalent metal cation(s) to activate the water molecule in order to carry out their catalytic action on peptide bonds by nucleophilic attack. Metallopeptidases from parasitic protozoa, including Toxoplasma, are investigated because of their crucial role in parasite biology. In the present study, we screened the T. gondii database using PFAM motifs specific for metallopeptidases in association with the MEROPS peptidase Database (release 10.0). In all, 49 genes encoding proteins with metallopeptidase signatures were identified in the Toxoplasma genome. An Interpro Search enabled us to uncover their domain/motif organization, and orthologs with the highest similarity by BLAST were used for annotation. These 49 Toxoplasma metallopeptidases clustered into 15 families described in the MEROPS database. Experimental expression analysis of their genes in the tachyzoite stage revealed transcription for all genes studied. Further research on the role of these peptidases should increase our knowledge of basic Toxoplasma biology and provide opportunities to identify novel therapeutic targets. This type of study would also open a path towards the comparative biology of apicomplexans.https://doi.org/10.1051/parasite/2018025Toxoplasma gondiimetallopeptidaseendopeptidasecarboxypeptidaseaminopeptidaseenzymatic activity
collection DOAJ
language English
format Article
sources DOAJ
author Escotte-Binet Sandie
Huguenin Antoine
Aubert Dominique
Martin Anne-Pascaline
Kaltenbach Matthieu
Florent Isabelle
Villena Isabelle
spellingShingle Escotte-Binet Sandie
Huguenin Antoine
Aubert Dominique
Martin Anne-Pascaline
Kaltenbach Matthieu
Florent Isabelle
Villena Isabelle
Metallopeptidases of Toxoplasma gondii: in silico identification and gene expression
Parasite
Toxoplasma gondii
metallopeptidase
endopeptidase
carboxypeptidase
aminopeptidase
enzymatic activity
author_facet Escotte-Binet Sandie
Huguenin Antoine
Aubert Dominique
Martin Anne-Pascaline
Kaltenbach Matthieu
Florent Isabelle
Villena Isabelle
author_sort Escotte-Binet Sandie
title Metallopeptidases of Toxoplasma gondii: in silico identification and gene expression
title_short Metallopeptidases of Toxoplasma gondii: in silico identification and gene expression
title_full Metallopeptidases of Toxoplasma gondii: in silico identification and gene expression
title_fullStr Metallopeptidases of Toxoplasma gondii: in silico identification and gene expression
title_full_unstemmed Metallopeptidases of Toxoplasma gondii: in silico identification and gene expression
title_sort metallopeptidases of toxoplasma gondii: in silico identification and gene expression
publisher EDP Sciences
series Parasite
issn 1776-1042
publishDate 2018-01-01
description Metallopeptidases are a family of proteins with domains that remain highly conserved throughout evolution. These hydrolases require divalent metal cation(s) to activate the water molecule in order to carry out their catalytic action on peptide bonds by nucleophilic attack. Metallopeptidases from parasitic protozoa, including Toxoplasma, are investigated because of their crucial role in parasite biology. In the present study, we screened the T. gondii database using PFAM motifs specific for metallopeptidases in association with the MEROPS peptidase Database (release 10.0). In all, 49 genes encoding proteins with metallopeptidase signatures were identified in the Toxoplasma genome. An Interpro Search enabled us to uncover their domain/motif organization, and orthologs with the highest similarity by BLAST were used for annotation. These 49 Toxoplasma metallopeptidases clustered into 15 families described in the MEROPS database. Experimental expression analysis of their genes in the tachyzoite stage revealed transcription for all genes studied. Further research on the role of these peptidases should increase our knowledge of basic Toxoplasma biology and provide opportunities to identify novel therapeutic targets. This type of study would also open a path towards the comparative biology of apicomplexans.
topic Toxoplasma gondii
metallopeptidase
endopeptidase
carboxypeptidase
aminopeptidase
enzymatic activity
url https://doi.org/10.1051/parasite/2018025
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