Influence of Genotype on High Glucosinolate Synthesis Lines of <i>Brassica rapa</i>
This study was conducted to investigate doubled haploid (DH) lines produced between high GSL (HGSL) <i>B</i><i>rassica rapa</i> ssp. <i>trilocularis</i> (yellow sarson) and low GSL (LGSL) <i>B. rapa</i> ssp. <i>chinensis</i> (pak choi) pare...
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doaj-82daa928a9264ed7bb371ecec1c847552021-07-23T13:45:20ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672021-07-01227301730110.3390/ijms22147301Influence of Genotype on High Glucosinolate Synthesis Lines of <i>Brassica rapa</i>Prabhakaran Soundararajan0Sin-Gi Park1So Youn Won2Mi-Sun Moon3Hyun Woo Park4Kang-Mo Ku5Jung Sun Kim6Genomics Division, Department of Agricultural Bio-Resources, National Institute of Agricultural Sciences, Rural Development Administration, Wansan-gu, Jeonju 54874, KoreaBioinformatics Team of Theragen Etex Institute, Suwon 16229, KoreaGenomics Division, Department of Agricultural Bio-Resources, National Institute of Agricultural Sciences, Rural Development Administration, Wansan-gu, Jeonju 54874, KoreaGenomics Division, Department of Agricultural Bio-Resources, National Institute of Agricultural Sciences, Rural Development Administration, Wansan-gu, Jeonju 54874, KoreaGenomics Division, Department of Agricultural Bio-Resources, National Institute of Agricultural Sciences, Rural Development Administration, Wansan-gu, Jeonju 54874, KoreaBK21 Interdisciplinary Program in IT-Bio Convergence System, Chonnam National University, Gwangju 61186, KoreaGenomics Division, Department of Agricultural Bio-Resources, National Institute of Agricultural Sciences, Rural Development Administration, Wansan-gu, Jeonju 54874, KoreaThis study was conducted to investigate doubled haploid (DH) lines produced between high GSL (HGSL) <i>B</i><i>rassica rapa</i> ssp. <i>trilocularis</i> (yellow sarson) and low GSL (LGSL) <i>B. rapa</i> ssp. <i>chinensis</i> (pak choi) parents. In total, 161 DH lines were generated. GSL content of HGSL DH lines ranged from 44.12 to 57.04 μmol·g<sup>−1</sup>·dry weight (dw), which is within the level of high GSL <i>B. rapa</i> ssp. <i>trilocularis</i> (47.46 to 59.56 μmol g<sup>−1</sup> dw). We resequenced five of the HGSL DH lines and three of the LGSL DH lines. Recombination blocks were formed between the parental and DH lines with 108,328 single-nucleotide polymorphisms in all chromosomes. In the measured GSL, gluconapin occurred as the major substrate in HGSL DH lines. Among the HGSL DH lines, BrYSP_DH005 had glucoraphanin levels approximately 12-fold higher than those of the HGSL mother plant. The hydrolysis capacity of GSL was analyzed in HGSL DH lines with a Korean pak choi cultivar as a control. Bioactive compounds, such as 3-butenyl isothiocyanate, 4-pentenyl isothiocyanate, 2-phenethyl isothiocyanate, and sulforaphane, were present in the HGSL DH lines at 3-fold to 6.3-fold higher levels compared to the commercial cultivar. The selected HGSL DH lines, resequencing data, and SNP identification were utilized for genome-assisted selection to develop elite GSL-enriched cultivars and the industrial production of potential anti-cancerous metabolites such as gluconapin and glucoraphanin.https://www.mdpi.com/1422-0067/22/14/7301biologically active compoundsglucosinolate synthesisrecombinant blocksdoubled haploid linesisothiocyanatescancer prevention |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Prabhakaran Soundararajan Sin-Gi Park So Youn Won Mi-Sun Moon Hyun Woo Park Kang-Mo Ku Jung Sun Kim |
spellingShingle |
Prabhakaran Soundararajan Sin-Gi Park So Youn Won Mi-Sun Moon Hyun Woo Park Kang-Mo Ku Jung Sun Kim Influence of Genotype on High Glucosinolate Synthesis Lines of <i>Brassica rapa</i> International Journal of Molecular Sciences biologically active compounds glucosinolate synthesis recombinant blocks doubled haploid lines isothiocyanates cancer prevention |
author_facet |
Prabhakaran Soundararajan Sin-Gi Park So Youn Won Mi-Sun Moon Hyun Woo Park Kang-Mo Ku Jung Sun Kim |
author_sort |
Prabhakaran Soundararajan |
title |
Influence of Genotype on High Glucosinolate Synthesis Lines of <i>Brassica rapa</i> |
title_short |
Influence of Genotype on High Glucosinolate Synthesis Lines of <i>Brassica rapa</i> |
title_full |
Influence of Genotype on High Glucosinolate Synthesis Lines of <i>Brassica rapa</i> |
title_fullStr |
Influence of Genotype on High Glucosinolate Synthesis Lines of <i>Brassica rapa</i> |
title_full_unstemmed |
Influence of Genotype on High Glucosinolate Synthesis Lines of <i>Brassica rapa</i> |
title_sort |
influence of genotype on high glucosinolate synthesis lines of <i>brassica rapa</i> |
publisher |
MDPI AG |
series |
International Journal of Molecular Sciences |
issn |
1661-6596 1422-0067 |
publishDate |
2021-07-01 |
description |
This study was conducted to investigate doubled haploid (DH) lines produced between high GSL (HGSL) <i>B</i><i>rassica rapa</i> ssp. <i>trilocularis</i> (yellow sarson) and low GSL (LGSL) <i>B. rapa</i> ssp. <i>chinensis</i> (pak choi) parents. In total, 161 DH lines were generated. GSL content of HGSL DH lines ranged from 44.12 to 57.04 μmol·g<sup>−1</sup>·dry weight (dw), which is within the level of high GSL <i>B. rapa</i> ssp. <i>trilocularis</i> (47.46 to 59.56 μmol g<sup>−1</sup> dw). We resequenced five of the HGSL DH lines and three of the LGSL DH lines. Recombination blocks were formed between the parental and DH lines with 108,328 single-nucleotide polymorphisms in all chromosomes. In the measured GSL, gluconapin occurred as the major substrate in HGSL DH lines. Among the HGSL DH lines, BrYSP_DH005 had glucoraphanin levels approximately 12-fold higher than those of the HGSL mother plant. The hydrolysis capacity of GSL was analyzed in HGSL DH lines with a Korean pak choi cultivar as a control. Bioactive compounds, such as 3-butenyl isothiocyanate, 4-pentenyl isothiocyanate, 2-phenethyl isothiocyanate, and sulforaphane, were present in the HGSL DH lines at 3-fold to 6.3-fold higher levels compared to the commercial cultivar. The selected HGSL DH lines, resequencing data, and SNP identification were utilized for genome-assisted selection to develop elite GSL-enriched cultivars and the industrial production of potential anti-cancerous metabolites such as gluconapin and glucoraphanin. |
topic |
biologically active compounds glucosinolate synthesis recombinant blocks doubled haploid lines isothiocyanates cancer prevention |
url |
https://www.mdpi.com/1422-0067/22/14/7301 |
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