EvDTree: structure-dependent substitution profiles based on decision tree classification of 3D environments
<p>Abstract</p> <p>Background</p> <p>Structure-dependent substitution matrices increase the accuracy of sequence alignments when the 3D structure of one sequence is known, and are successful e.g. in fold recognition. We propose a new automated method, EvDTree, based on...
Main Authors: | Gracy Jérôme, Chiche Laurent, Gelly Jean-Christophe |
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Format: | Article |
Language: | English |
Published: |
BMC
2005-01-01
|
Series: | BMC Bioinformatics |
Online Access: | http://www.biomedcentral.com/1471-2105/6/4 |
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