Identification of Factors Affecting Metastatic Gastric Cancer Patients’ Survival Using the Random Survival Forest and Comparison with Cox Regression Model

Background and Objectives: In survival analysis, using the Cox model to determine the effective factors requires the assumptions whose failure of leads to biased results. The aim of this paper was to determine the factors affecting the survival of metastatic gastric cancer patients using the non-par...

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Main Authors: M Safari, M Abbasi, F Gohari Ensaf, Z Berangi, GH Roshanaei
Format: Article
Language:fas
Published: Tehran University of Medical Sciences 2020-01-01
Series:مجله اپیدمیولوژی ایران
Subjects:
Online Access:http://irje.tums.ac.ir/article-1-6424-en.html
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spelling doaj-84ec7dcbbad843458b9e286052e2a7ff2021-10-02T18:53:34ZfasTehran University of Medical Sciencesمجله اپیدمیولوژی ایران1735-74892228-75072020-01-01154343351Identification of Factors Affecting Metastatic Gastric Cancer Patients’ Survival Using the Random Survival Forest and Comparison with Cox Regression ModelM Safari0M Abbasi1F Gohari Ensaf2Z Berangi3GH Roshanaei4 Candidate of PhD, Department of Biostatistics, School of Public Health, Hamadan University of Medical‎ Sciences, Hamadan, Iran Assistant Professor, Department of Internal Medicine, School of Medicine, Hamadan University of Medical Sciences, Hamadan, Iran MSc of Epidemiology, Students Research Center, Hamadan University of Medical Sciences, Hamadan, Iran MSc of Epidemiology, Students Research Center, Hamadan University of Medical Sciences, Hamadan, Iran Associate Professor, Department of Biostatistics, Modeling of Noncommunicable Disease Research Center, Hamadan University of Medical Sciences, Hamadan, Iran Background and Objectives: In survival analysis, using the Cox model to determine the effective factors requires the assumptions whose failure of leads to biased results. The aim of this paper was to determine the factors affecting the survival of metastatic gastric cancer patients using the non-parametric method of Randomized Survival Forest (RSF) model and to compare its result with the Cox model.   Methods: In this retrospective cohort study, 201 patients with metastatic gastric cancer were evaluated in Hamadan Province. Patient survival was calculated from diagnosis to death or end of study. Demographic characteristics (such as gender and age) and clinical variables (including stage, tumor size, etc.) were extracted from the patient records. Factors affecting survival were determined using the Cox model and RSF. Data analysis was performed using the R3.4.3 software and RandomForestSRC and survival packages.   Results: The mean (SD) age of patients was 61.5 (12.9) years old. The Cox model showed that chemotherapy (p=0.033) was effective in survival, and the results of fitting the RSF model showed that the most important variables affecting survival were type of surgery, location of metastasis, chemotherapy, age, tumor grade, surgery, number of involved lymph nodes, sex and radiotherapy. Based on the model appropriateness, the RSF model with log-rank split rule had a better performance compared to the Cox model.   Conclusion: If the number of variables is high and there is a relationship between the variables, the RSF method identifies the important and effective variables on survival with high accuracy without requiring restrictive assumptions compared to the Cox model.http://irje.tums.ac.ir/article-1-6424-en.htmlgastric cancerrandom survival forest (rsf)metastasiscox modelsurvival
collection DOAJ
language fas
format Article
sources DOAJ
author M Safari
M Abbasi
F Gohari Ensaf
Z Berangi
GH Roshanaei
spellingShingle M Safari
M Abbasi
F Gohari Ensaf
Z Berangi
GH Roshanaei
Identification of Factors Affecting Metastatic Gastric Cancer Patients’ Survival Using the Random Survival Forest and Comparison with Cox Regression Model
مجله اپیدمیولوژی ایران
gastric cancer
random survival forest (rsf)
metastasis
cox model
survival
author_facet M Safari
M Abbasi
F Gohari Ensaf
Z Berangi
GH Roshanaei
author_sort M Safari
title Identification of Factors Affecting Metastatic Gastric Cancer Patients’ Survival Using the Random Survival Forest and Comparison with Cox Regression Model
title_short Identification of Factors Affecting Metastatic Gastric Cancer Patients’ Survival Using the Random Survival Forest and Comparison with Cox Regression Model
title_full Identification of Factors Affecting Metastatic Gastric Cancer Patients’ Survival Using the Random Survival Forest and Comparison with Cox Regression Model
title_fullStr Identification of Factors Affecting Metastatic Gastric Cancer Patients’ Survival Using the Random Survival Forest and Comparison with Cox Regression Model
title_full_unstemmed Identification of Factors Affecting Metastatic Gastric Cancer Patients’ Survival Using the Random Survival Forest and Comparison with Cox Regression Model
title_sort identification of factors affecting metastatic gastric cancer patients’ survival using the random survival forest and comparison with cox regression model
publisher Tehran University of Medical Sciences
series مجله اپیدمیولوژی ایران
issn 1735-7489
2228-7507
publishDate 2020-01-01
description Background and Objectives: In survival analysis, using the Cox model to determine the effective factors requires the assumptions whose failure of leads to biased results. The aim of this paper was to determine the factors affecting the survival of metastatic gastric cancer patients using the non-parametric method of Randomized Survival Forest (RSF) model and to compare its result with the Cox model.   Methods: In this retrospective cohort study, 201 patients with metastatic gastric cancer were evaluated in Hamadan Province. Patient survival was calculated from diagnosis to death or end of study. Demographic characteristics (such as gender and age) and clinical variables (including stage, tumor size, etc.) were extracted from the patient records. Factors affecting survival were determined using the Cox model and RSF. Data analysis was performed using the R3.4.3 software and RandomForestSRC and survival packages.   Results: The mean (SD) age of patients was 61.5 (12.9) years old. The Cox model showed that chemotherapy (p=0.033) was effective in survival, and the results of fitting the RSF model showed that the most important variables affecting survival were type of surgery, location of metastasis, chemotherapy, age, tumor grade, surgery, number of involved lymph nodes, sex and radiotherapy. Based on the model appropriateness, the RSF model with log-rank split rule had a better performance compared to the Cox model.   Conclusion: If the number of variables is high and there is a relationship between the variables, the RSF method identifies the important and effective variables on survival with high accuracy without requiring restrictive assumptions compared to the Cox model.
topic gastric cancer
random survival forest (rsf)
metastasis
cox model
survival
url http://irje.tums.ac.ir/article-1-6424-en.html
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